Streptomyces sp. CNQ-509: AA958_04370
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Entry
AA958_04370 CDS
T03968
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
strc
Streptomyces sp. CNQ-509
Brite
KEGG Orthology (KO) [BR:
strc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strc03021
]
AA958_04370
Transcription machinery [BR:
strc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AA958_04370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_Crp_2
HTH_23
KORA
DUF134
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AKH81549
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All DBs
Position
1091054..1091899
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AA seq
281 aa
AA seq
DB search
MAHVRTRRKHPHHDAPDTSAQFRRLAGMPEGPDKKALRQEVVRAWMPMAARLARQFRNRG
EALEDLEQVAHLGLVKAVRRYDAGRSSAFESFAVPTIVGELKRHFRDHMWGVHVPRRVQE
LRNRVRSAGLALAVTADDRFPAIADIAEAAELTEEEVRTGLEAWESYATLSLDAALPGAG
DGYSLLDTFGSTEPGFDQAVDREAVRPHLSRLPEREREILYLRFFCDMTQRGIAEHLGIS
QMHVSRLISHSCARVCERVEADQAAAGRTPAPDPLGSATAA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtggcacacgtccggacaaggagaaagcacccgcaccacgacgcacccgacacctccgcg
cagttccgccggctggccgggatgcccgaggggccggacaagaaggccctgcggcaggag
gtcgtccgcgcatggatgccgatggccgcgcggctggcccgccagttcaggaaccgcggc
gaggcgctggaggacctggagcaggtcgcgcacctcggcctggtgaaggcggtgaggcgg
tacgacgcgggacgcagcagcgccttcgagagcttcgccgtgccgacgatcgtcggtgaa
ctgaagcgccacttccgtgaccacatgtggggcgtccacgtgccccgccgggtccaggag
ctgcgcaaccgcgtccgcagcgcggggctggcgctggccgtcacggcagacgaccggttc
ccggcgatcgcggacatcgccgaggcggcggagctgaccgaggaggaggtgcgtacgggc
ctggaggcgtgggagagctacgccacgctctccctcgacgccgccctgcccggcgccggg
gacggctactcgctcctggacacgttcggcagcaccgagcccggcttcgaccaggccgtg
gaccgcgaggccgtgcgaccgcacctgagccggctgccggagcgcgagcgcgagatcctc
tatctgcgcttcttctgcgacatgacgcagcgcggcatcgccgaacacctcggcatctcg
cagatgcacgtctcccggctgatcagccactcgtgcgcgcgcgtctgcgagcgcgtggag
gccgaccaggcggccgcgggccggacgcccgccccggatccgctcggctccgccaccgcc
gcgtag
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