Streptomyces sp. CNQ-509: AA958_11525
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Entry
AA958_11525 CDS
T03968
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
strc
Streptomyces sp. CNQ-509
Brite
KEGG Orthology (KO) [BR:
strc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strc03021
]
AA958_11525
Transcription machinery [BR:
strc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AA958_11525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
DUF7343
HTH_24
HTH_3
Apolipoprotein
MarR_2
GerE
MarR
KORA
Motif
Other DBs
NCBI-ProteinID:
AKH86692
UniProt:
A0A0F7NIR6
LinkDB
All DBs
Position
2782240..2783091
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AA seq
283 aa
AA seq
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MANAADAAGTAASFTGSIDELEGIAFDEVAPADARAMSKTLFDRLGTLEEGTHEYSYVRN
TLIELNLALVKFAASRFRSRSEPMEDIIQVGTIGLIKAIDRFEPARGVEFPTFAMPTIIG
EIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQQLDRAPTVDELAERLAIGRDEVVEG
MAASNAYTASSLDAQPEEDDSESTLADRIGYEDHGLEGIEYVESLKPLIAELTPRDRKIL
SLRFVANMTQSEIGEELGISQMHVSRLLSRTLVRLRKGLMVEE
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atcgcgaacgccgcggacgccgccggcacggcggcgtcgttcacggggagcatcgacgag
ctggagggcatcgccttcgacgaggtcgcccccgcggacgcgcgggccatgtcgaagacc
ctcttcgaccggctcggcaccctcgaagagggcacccacgagtactcgtacgtgcgcaac
accctgatcgaactcaacctggcgctggtgaagttcgccgcctcccggttccgctcgcgc
agcgagccgatggaggacatcatccaggtcggcacgatcgggctcatcaaggcgatcgac
cgcttcgagcccgcccgcggggtggagttccccaccttcgcgatgccgacgatcatcggc
gagatcaagcgcttcttccgcgacacctcctggtccgtacgcgtcccgcggcggctgcag
gagctgcgcctcgacctggcgaaggcgggcgacgagctggcacagcagctcgaccgcgcc
cccacggtcgacgagctggccgagcggctggccatcggcagggacgaggtcgtcgagggc
atggccgcctcgaacgcctacaccgccagctcgctggacgcgcagcccgaggaggacgac
tccgagagcaccctcgccgaccgcatcggctacgaggaccacggcctggagggcatcgag
tacgtcgagtccctcaagccgctgatagcggagctgacgccgcgcgaccggaagatcctc
tcgctgcgcttcgtggccaacatgacccagtcggagatcggcgaggagctgggcatctcg
cagatgcacgtctcccggctgctgtcgcggacgctggtgcggctgcgcaaggggctgatg
gtcgaggagtga
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