Streptomyces sp. CNQ-509: AA958_15305
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Entry
AA958_15305 CDS
T03968
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
strc
Streptomyces sp. CNQ-509
Brite
KEGG Orthology (KO) [BR:
strc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strc03021
]
AA958_15305
Transcription machinery [BR:
strc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AA958_15305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
GerE
DUF7343
HTH_3
HTH_28
MarR
DUF134
HTH_5
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AKH86790
LinkDB
All DBs
Position
3620598..3621593
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AA seq
331 aa
AA seq
DB search
MSARTAPPVPCPPASSPASPPPPGPAPAATTAATAAPGPASAAPGPPAAPADPAAAADPD
PAPGGSGASAGSGDPEAPRKPDSRALTRALFAELTALEPGTPEHTRVRTALIEANLPLVR
YAAARFRSRNEPMEDVLQVGTIGLIHAIDRFDPARGVQFPTFAMPTVIGEIKRYFRDNVR
TVHVPRRLHELWAQVSGATEDLTVRHGRAPTTAEIAAHLKIGEEEVRACREAGRSYYATS
LEAAQEGDGMPGLLDRLGYEDPALAGVEHRDLVRHLLVQLPEREQRILMLRYYRNMTQSQ
ISAELGLSQMHVSRLLSRSFARLRSANRIDS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgctcgtacggccccgccggtcccctgccctcccgcctccagccctgcctcgccc
ccaccccccggcccggcccccgccgccacgacggcagccacggccgcccccggccccgcg
tcggccgcccccggccctccggccgcccccgccgatcccgcggcggcggccgaccccgat
cccgcccccggcggctccggcgcatcagccggatccggcgaccccgaagccccccgtaaa
cccgactcccgcgccctcacccgcgcgctcttcgccgaactcaccgcgctcgaacccggc
acccccgagcacacccgcgtccgtaccgcgctgatcgaggccaatctccccctcgtgcgc
tacgccgccgcccgcttccgcagccgcaacgagcccatggaggacgtcctccaggtcggc
accatcggcctcatccacgccatcgaccgcttcgacccggcccgcggcgtgcagttcccg
accttcgccatgcccaccgtgatcggcgagatcaaacgttacttcagggacaacgtgcgc
accgtccacgtcccccgccggctgcacgagctgtgggcccaggtcagcggcgccaccgag
gacctgaccgtacggcacggccgcgcgcccaccaccgccgagatcgccgcgcatctgaag
atcggcgaggaggaggtgcgggcctgccgcgaggccggccgctcgtactacgccacctcc
ctcgaagccgcccaggagggcgacggcatgccgggcctgctggaccggctcgggtacgag
gacccggccctggccggcgtcgagcaccgcgacctcgtacgccacctcctcgtccaactg
ccggagcgcgaacagcgcatcctcatgctgcgctactaccgcaacatgacccagtcgcag
atcagcgccgagctcgggctgtcccagatgcacgtgtcccggctgctgtcccgcagcttc
gcacgactgcgatccgcaaaccggatcgattcctaa
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