Streptomyces sp. CNQ-509: AA958_15310
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Entry
AA958_15310 CDS
T03968
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
strc
Streptomyces sp. CNQ-509
Brite
KEGG Orthology (KO) [BR:
strc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strc03021
]
AA958_15310
Transcription machinery [BR:
strc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AA958_15310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_Crp_2
HTH_23
DUF7343
HTH_3
MarR
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AKH86791
UniProt:
A0A0F7NER8
LinkDB
All DBs
Position
3622089..3622919
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AA seq
276 aa
AA seq
DB search
MPAPAAPADDAAPVEADAAPSGSIDTRTLSRALFLRLAELPPGDSPERSYVRDTLIELNL
PLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCRRGTEFPTFAMPTVIGEIKRYFR
DTSWSVRVPRRLQELRLALTKASDDLAQQLDRSPTVPELAQYLGVSDEDVVDGLAVGNAY
TASSLDSPAPEEDGGEGSLADRLGYEDSALEGVEYRESLKPLLAQLPARERRIIMLRFFG
NMTQSQIGDEVGISQMHVSRLLTRTLAQLRAGLIAD
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atcccggcccccgccgccccggcggacgacgccgcccccgtcgaggccgatgccgccccc
tccggcagcatcgacacccgtacgctctcccgcgccctcttcctccgcctcgccgagctg
ccccccggggacagccccgagcggtcctacgtgcgcgacaccctgatcgagctgaacctg
ccgctcgtgcgctacgccgcggcccgcttccgcagccgtaacgagcccatggaggacatc
gtccaggtcggcacgatcggactgatcaaggcgatcgacaggttcgactgccgtcgcggc
accgagttcccgaccttcgccatgcccacggtcatcggcgagatcaagcgctacttccgg
gacacgagctggtccgtgcgcgtcccgcgccggctccaggagctgcggctggcgctcacc
aaggcgagcgacgacctcgcgcagcagctcgaccgctcgccgaccgtgccggaactcgcc
cagtacctcggggtgtctgacgaggacgtggtcgacggcctcgccgtcggcaacgcgtac
acggccagctccctcgactccccggccccggaggaggacggcggcgagggctcgctcgcg
gaccgcctcgggtacgaggactcggcgctggagggcgtggagtaccgcgagtcgctgaag
ccgctgctggctcaactcccggcgcgggagcggcggatcatcatgctgcggttcttcggg
aacatgacgcagtcccagatcggcgacgaggtgggcatctcgcagatgcacgtgtcgcgg
ctgctgacgcggacgctcgcgcagctccgggcagggctgatcgcggactga
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