Streptomyces sp. CNQ-509: AA958_23455
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Entry
AA958_23455 CDS
T03968
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
strc
Streptomyces sp. CNQ-509
Pathway
strc03420
Nucleotide excision repair
strc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
strc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AA958_23455
03430 Mismatch repair
AA958_23455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strc03400
]
AA958_23455
Enzymes [BR:
strc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AA958_23455
DNA repair and recombination proteins [BR:
strc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AA958_23455
MMR (mismatch excision repair)
Other MMR factors
AA958_23455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKH84672
UniProt:
A0A0F7ND53
LinkDB
All DBs
Position
5415720..5419016
Genome browser
AA seq
1098 aa
AA seq
DB search
MPARITHPDQLKELLGIPFTAEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGR
VAPEQVLGLTFTNKAAAELAERVRRALAQAGVTPAGGADGAYGEGAYGDGVPGDGAAEPG
EPRISTYHAFAGQLLKDHGLRIGLEPGARLLADATRYQLAARVLRTAPGPYPALTKSLPT
LVSELLALDAELAEHLVDPDALADFGAAQLAALDRVRLTNDELRKAPRAAQARLELLDLV
RAYRREKRRRDLLDFGDQIAHSALLAEDHPAVGRLLREECRVVLLDEYQDTSVAQRRLLA
GLFGGGTGHAVTAVGDPCQAIYGWRGASVANLDDFPAHFPHADGTPARRQALGENRRSGG
RLLELANGLAAPLRARHVGVEALRPAPGAERHGTVRCALLPTYGAELEWLADSVAHLVRT
GTAPGDVAVLCRTAGDFGDIQAALVARDVPVEVVGLAGLLDLPEVADLVAMCEVLQDPTA
NAALVRLLTGPRWRIGPRDLALLGRRARLLVTTARTDGEQDPDERLAQAVEGVDPAEVAS
LADALDTFLEARQPDDGLPFGAAARKRFGRLAAELRDLRRSLADPLMDVLHRVLGATGLE
IELSASPHALAARRRETLARFLDVAADYASSAALDGEATLLAFLGFLRTAAQYEKGLDSS
LPGDGRDTVKVLTAHKAKGLEWDVVVVPGLVEKHFPSRQPRESWVTQGKVLPHALRGDAE
TLPDVAEWTARGLKDFKAAMREHQEVEELRLGYVTVTRPRSLLLGSGHWWGPTQKEARGP
SAFLHALREHCEGGGGEVEEWAPEPPKAAENPALAEHAAERAWPLPLAPAATARRREAAA
AVEAALTRRATADGHAPGTGPDGARAHPLGPADVRVVESWDRDLDALEAELLAARRPVRD
VTLPASLTASQLLRLAADAEAFTQELARPMPRPPMPAARRGTRFHAWVESRFEALPLPML
GPDELPGGEEDAPEIADERDLAALKESFERSPYARRTPYRLEAPFQLSLAGRMVRGRIDA
VYRDPGGGYEIVDWKTGRSGSADPLQLAVYRLAWAEQERLPLADVTAAFLYVRTGEIVRP
ATLPGRAELEALLSGRTD
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgccggcccgtatcacccaccccgatcagctcaaggagctcctcgggatccccttcacc
gccgagcagacggcgtgcatcaccgcaccgcccgccccgcaggtcatcgtggcgggtgcg
gggtccggcaagacgacggtgatggcggcccgggtcgtgtggctggtcggtacggggcgg
gtggcaccggagcaggtgctggggctgacgttcaccaacaaggccgcggcggagctggcg
gagcgggtgcgccgggcgctggcgcaggcgggggtcacgccggcgggcggtgcggacggg
gcgtacggcgaaggcgcgtacggcgacggggtgccgggcgacggcgccgcggagcccggc
gagccgcggatctccacgtaccacgccttcgccggccaactgctcaaggaccacggcctg
cgcatcggcctcgaacccggtgcccgcctcctcgccgacgccacccgctaccagctcgcc
gcccgcgtcctgcgcaccgcccccggcccgtaccccgcgctgacgaaatccctcccgacg
ctcgtcagcgaactcctcgcgctcgacgccgagctggcggaacacctcgtggatccggac
gcgctggcggacttcggcgccgcgcagctcgccgctctcgaccgggtccggctcaccaac
gacgagctgcgcaaggcccccagggccgcgcaggcccggctggagctgctcgacctcgta
cgggcctaccggcgcgagaagcgccgccgcgacctcctcgacttcggcgaccagatcgcc
cactccgcgctgctcgccgaggaccacccggcggtcgggcggctgctgcgcgaggagtgc
cgggtcgtgctgctggacgagtaccaggacacctccgtcgcccagcggcggctgctggcc
gggctgttcggcggtggtacggggcacgcggtgaccgccgtcggcgacccctgccaggcg
atctacggctggcgcggcgcctccgtcgccaacctcgacgacttccccgcccacttcccg
cacgccgacggcacccccgcgcgccgccaggcgctcggggagaaccgccgcagcggcggg
cgcctgctcgaactcgccaacggcctcgccgcccccctgcgcgcccgccacgtcggcgtg
gaggcgctgcgccccgccccgggcgcggagcggcacggcacggtgcgctgcgcgctgctg
ccgacgtacggcgcggagctggagtggctggcggactcggtggcgcatctggtgcgtacg
ggcacggcccccggcgacgtcgccgtcctgtgccgcaccgcgggcgacttcggcgacatc
caggcggcgctggtcgcccgggacgtccccgtggaggtcgtcgggctcgccgggctgctg
gacctgccggaggtcgcggacctggtggcgatgtgcgaggtgctccaggacccgacggcc
aacgccgcgctcgtccgcctgctgaccggcccgcggtggcgcatcggcccccgcgacctg
gcgctgctggggcgccgcgcgcggctgctggtgaccacggcgcgtacggacggcgaacag
gaccccgacgagcggctggcgcaggccgtggagggcgtcgacccggcggaggtggcgtcg
ctcgccgacgcgctggacacgttcctggaggcccggcagcccgacgacgggctgccgttc
ggcgcggcggcgcggaagcggttcggccggctggcggcggagctgcgggacctgcggcgg
tcgctggcggatccgctgatggacgtgctgcaccgggtgctcggggcgacgggcctggag
atcgagctgtccgcgtcgccgcacgcgctggcggcgcggcggcgcgagacgctggcgcgc
ttcctcgacgtcgccgccgactacgcctcctccgccgccctcgacggcgaggcgacgcta
ctggcgttcctgggcttcctgcggaccgcggcgcagtacgagaaggggctcgacagctcg
ctgccgggcgacgggcgggacacggtcaaggtgctcacggcgcacaaggcgaagggcctg
gagtgggacgtcgtggtggtgccggggctggtggagaagcacttcccgagccggcagccg
cgcgagtcgtgggtcacgcagggcaaggtgctgccgcacgcgctgcggggcgacgcggag
acgctgccggacgtggcggagtggacggcgcgggggctgaaggacttcaaggccgcgatg
cgggagcaccaggaggtggaggagctgcgcctcgggtacgtcaccgtgacgcgcccccgg
tcgctgctcctgggctccgggcactggtggggtccgacgcagaaggaggcgcggggcccg
tcggcgttcctgcacgcgctgcgggagcactgcgagggcggcggcggcgaggtcgaggag
tgggccccggagcccccgaaggcggcggagaacccggccctggcggagcacgccgcggag
cgcgcgtggccgctcccgctcgccccggcggcgacggcccgccgccgggaggccgcggcg
gcggtggaggcggcactgacccgccgggcgacggcggacgggcacgctcccggcaccggc
cccgacggcgcccgggcccaccccctcgggcccgccgacgtgcgggtggtcgagtcctgg
gaccgggacctcgacgccctcgaagcggagctgctcgccgcccgccggcccgtacgggac
gtcaccctgcccgcctccctcaccgcctcgcagctcctccggctcgccgccgacgccgag
gcgttcacgcaggaactggcccggcccatgccccggccgccgatgcccgcggcgcggcgc
gggacgcggttccacgcctgggtcgagtcgcggttcgaggcgctgccgctgcccatgctc
ggccccgacgagctgcccggcggcgaggaggacgccccggagatcgccgacgagcgcgat
ctggccgccctcaaggagtccttcgagcggtccccgtacgcccggcgcacgccgtaccga
ctggaggcccccttccagctcagcctcgccgggcgcatggtccgcggccgtatcgacgcc
gtctaccgggaccccggcggcggctacgagatcgtcgactggaagaccggccgcagcggc
agcgccgaccccctccagctcgccgtctaccggctcgcctgggccgagcaggagcggctg
ccgctcgccgacgtgaccgccgccttcctctacgtacgcaccggggagatcgtgcgtccg
gccacactcccgggaagagcggagcttgaggccctgctgtccggccggacggattag
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