Streptomyces sp. CNQ-509: AA958_26730
Help
Entry
AA958_26730 CDS
T03968
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
strc
Streptomyces sp. CNQ-509
Pathway
strc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AA958_26730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strc03019
]
AA958_26730
03400 DNA repair and recombination proteins [BR:
strc03400
]
AA958_26730
Enzymes [BR:
strc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AA958_26730
Messenger RNA biogenesis [BR:
strc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AA958_26730
DNA repair and recombination proteins [BR:
strc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AA958_26730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AKH85231
UniProt:
A0A0F7NAW5
LinkDB
All DBs
Position
6208535..6210694
Genome browser
AA seq
719 aa
AA seq
DB search
MDDQELRAEADAVLAGLVGDAGGPARLREDQWQAVDALVRERRRALVVQRTGWGKSAVYF
VATALLRRRGAGPTVIVSPLLALMRNQVEAAARAGIRARTINSANPEEWGAIHEEVERGE
TDVLLVSPERLNSVDFRDRLLPELAATTGLLVVDEAHCISDWGHDFRPDYRRLRAMLADL
PEGVPVLATTATANARVTADVAEQLGTGGGEALVLRGPLDRESLRLGVVRLPDAAHRLAW
LAEHLGELPGSGIVYALTVAAAEEAAAFLRQRGFPVASYTGRTENADRLQAEEDLLANRV
KALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVDHADVLLLPGREDEAI
WRYFADTAFPPEAQVRQTLAALADAGRPLSVPALEAAVDLRRTRLETMLKVLDVDGAVRR
VKGGWTATGRAWEYDTERYAWVARQRAAEQQAMRDYVSTPGCRMEFLRAQLDDEGAEPCG
RCDNCAGPWIGAGVSAEALTGAEKELDRPGTEIEPRRMWPTGMAALGIDLKGRIPAGEQG
ATGRALGRLSDIGWGNRLRPLLAPHTPDAPVPDDVLRAAVGVLADWARSPGGWAAGGPDA
PARPVGVVAVPSTSRPLLVDSLARGIATVGRLPYLGTLAYADPDGGHAVRRSNSAQRLAT
LTGTFTVSGDLAAALAGNPGPVLLVDDYTDSGWTLAVASRLLRRAGAGAVLPLVLAANG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcaggagctgcgcgccgaagccgacgccgttctcgccgggctcgtcggcgac
gccggcggcccggcccggctgcgggaggaccagtggcaggccgtggacgccctcgtgcgc
gagcggcgccgggcgctggtggtgcagcgcacgggctggggcaagtcggcggtgtacttc
gtcgccaccgcgctgctgcgccgccgcggtgcgggccccaccgtgatcgtttcgccgctg
ctggcgctcatgcgcaaccaggtcgaggccgcggcgcgggccggcatccgggcccgtacg
atcaactcggccaaccccgaggagtggggcgccatccatgaggaggtcgagcgcggggag
accgacgtgctcctcgtcagccccgagcggctgaactccgtggacttccgcgaccggctg
ctgcccgaactggccgccacgaccggcctcctcgtcgtcgacgaggcgcactgcatctcc
gactggggccacgacttccgccccgactaccgacggctgcgcgccatgctcgccgacctg
cctgagggcgtgcccgtgctggcgaccaccgcgacggcgaacgcgcgcgtgaccgccgac
gtcgccgagcagctcggcaccggcggcggcgaggccctggtgctgcgcggcccgctggac
cgggagagcctgcggctcggcgtggtccggctgcccgacgcggcgcaccgcctcgcctgg
ctcgccgagcacctgggcgagctgccgggatccgggatcgtctacgcgctgacggtcgcc
gccgccgaggaggccgcggccttcctccggcagcgcggtttccccgtggcctcgtacacg
gggcgcacggagaacgccgaccggctgcaggccgaggaggacctgctggcgaaccgggtc
aaggcgctggtcgcgacgtccgcgctgggcatggggttcgacaagccggacctcggcttc
gtcgtccacctcggctcgccgtcctcgccgatcgcgtactaccagcaggtgggccgcgcc
ggccggggcgtcgaccacgccgacgtactgctgctgccgggccgggaggacgaggcgatc
tggcgttacttcgccgacaccgccttcccgcccgaagcgcaggtccgccagaccctcgcc
gcgctcgcggacgccggccgcccgctgtccgtcccggccctggaggcggccgtcgacctc
aggcgtacgcggctggagacgatgctgaaggtgctcgacgtcgacggggcggtccggcgg
gtgaagggcggctggacggccaccggccgcgcatgggagtacgacaccgagcggtacgcg
tgggtggcgcggcagcgcgccgccgaacagcaggccatgcgggactacgtgagcacgccg
ggctgccggatggagttcctgcgcgcgcagttggacgacgagggggcggagccgtgcggg
cgctgcgacaactgcgcgggcccgtggatcggcgcgggcgtctcggcggaggcgctgacg
ggcgccgagaaggagctggaccggcccgggaccgagatcgagccgcgccggatgtggccg
accggcatggccgccctgggcatcgacctcaaggggcgtatcccggcgggcgagcagggc
gccaccgggcgggcgctgggccgcctctccgacatcggctggggcaacaggctgcggccg
ctgctcgcgccgcacacccccgacgcacccgtgccggacgacgtgctgcgcgccgcggtc
ggcgtgctcgccgactgggcgcgttccccgggcggctgggcggcgggcgggccggacgcc
ccggcgcggccggtgggcgtcgtcgccgtgccgtccacgtcccggccgctgctggtcgac
tcgctcgcccggggcatcgccaccgtcgggcggctgccgtacctcggcacgctggcgtac
gcggacccggacggcggccacgccgtgcgccgcagcaactcggcgcagcggctcgccacc
ctcaccggcaccttcaccgtctccggcgacctcgccgccgccctggccggcaacccgggc
ccggtgctgctcgtcgacgactacaccgactccggctggaccctcgccgtcgcgtcccgg
ctgctgcggcgggcgggcgccggggcggtgctgccgctcgtcctcgcggcgaacggctga
DBGET
integrated database retrieval system
