Streptomyces sp. CNQ-509: AA958_27430
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Entry
AA958_27430 CDS
T03968
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
strc
Streptomyces sp. CNQ-509
Pathway
strc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AA958_27430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strc03019
]
AA958_27430
03400 DNA repair and recombination proteins [BR:
strc03400
]
AA958_27430
Enzymes [BR:
strc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AA958_27430
Messenger RNA biogenesis [BR:
strc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AA958_27430
DNA repair and recombination proteins [BR:
strc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AA958_27430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
AKH85346
UniProt:
A0A0F7NB75
LinkDB
All DBs
Position
complement(6376991..6378820)
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AA seq
609 aa
AA seq
DB search
MSSTEALQVLSKVFGYESFREGQQEIIDHVVGGGDALVLMPTGGGKSLCYQIPALVRPGT
GVVISPLIALMQDQVDALRALGVRAGFLNSTQDPDERRMVEAEFLAGEIDLLYLAPERLR
VESTMRLLDRGTVALFAIDEAHCVAQWGHDFRPDYLALSALSERWPDVPRIALTATATKA
THAEIASRLQLEQARHFVASFDRPNIQYRIVPKREPKKQLLELLRTEHAGDAGIVYCLSR
KSVEDTAAFLVENGIDALPYHAGLPAATRAEHQSRFLREEGMAIVATIAFGMGIDKPDVR
YVAHLDLPKSVEGYYQETGRAGRDGQPSTAWLAYGLQDVVQQRKLIDGSEGDDAHRRRAS
AHLDAMLALCESVDCRRSQLLAYFGQSGSPCGNCDTCLTPPESWDGTVAAQKLLSTVVRL
RRERRQKFGAGQIVDILMGRKTAKVIQHDHDTLSVFGVGDDLAEHEWRGVVRQLLAKGLL
AVEGDYGTLVLTEEADEVLYRGRKVPLRTEPKRAAKAAKAKSGSKRAEAVDLPAEAASLF
ERLRAWRGATAKEQGVPAYVIFHDATLRQIATERPGSLASLGSVSGVGENKLAKYGEQIL
AVVAEDDAG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagttccaccgaggcgctgcaggtcctcagcaaggtcttcggctacgagtcgttccgc
gaggggcagcaggagatcatcgaccatgtcgtgggcggcggcgacgccctcgtgctgatg
cccaccggcggcggcaagtccctgtgctatcagattcccgcgctggtcaggcccggtacc
ggtgtggtgatctcgccgctcatcgcgctcatgcaggaccaggtcgacgcgctgcgcgcc
ctcggcgtgcgggccgggttcctcaactccacgcaggatcccgacgagcggcggatggtg
gaggccgagttcctcgccggggagatcgacctgctctatctggcgcccgagcggctgcgg
gtggagtccacgatgcggctgctcgaccgcgggaccgtcgcgctgttcgccatcgacgag
gcgcactgcgtcgcgcagtgggggcacgacttccggcccgactacctcgcgctgtcggcg
ctctccgagcgctggccggacgtgccgcgcatcgcgctcaccgcgaccgcgaccaaggcg
acgcacgcggagatcgcgagccggctgcaactggagcaggcgcggcacttcgtggccagc
ttcgaccggccgaacatccagtaccgcatcgtgcccaagcgggagccgaagaagcagctc
ctggagctgctgcgcaccgagcacgcgggcgacgccggcatcgtctactgcctgtcgcgc
aagtccgtggaggacaccgcggccttcctcgtagagaacgggatcgacgcgctgccctac
cacgccgggctgcccgcggcgacccgcgccgagcaccagtcgcggttcctgcgcgaggag
ggcatggcgatcgtcgccaccatcgcgttcggcatgggcatcgacaagccggacgtgcgc
tacgtcgcccatctcgacctgccgaagtccgtcgaggggtactaccaggagaccggccgc
gcaggacgcgacggccagccgtccaccgcgtggctcgcgtacgggctccaggacgtggtg
cagcagcgcaagctcatcgacggctccgagggcgacgacgcgcaccggcggcgggcgagc
gcgcacctcgacgcgatgctcgcgctctgcgagagcgtcgactgccggcgctcgcagttg
ctcgcgtatttcggccagagcggctccccctgcggcaactgcgacacgtgcctcacgccc
cccgaatcctgggacggcacggtcgccgcgcagaagctgctgtccacggtggtgcggctg
cggcgcgagcggcggcagaagttcggcgccgggcagatcgtcgacatcctcatgggccgc
aagacggccaaggtcatccagcacgaccacgacacgctctcggtcttcggcgtcggcgac
gacctcgcggagcacgagtggcgcggtgtcgtacggcagttgctcgcgaaggggctcctg
gccgtcgagggcgactacggcacgctggtgctcaccgaggaagccgacgaggtgctctac
cggggccgcaaggtgccgctgcgcaccgagcccaagcgggcggcgaaggcggcgaaggcg
aagtccgggtccaagcgcgccgaggccgtcgatctgccggcggaggcggcgtcgctcttc
gagcggctgcgcgcgtggcggggtgcgacggcgaaggagcagggggtgcccgcgtacgtg
atcttccacgacgcgacgctgcggcagatcgccaccgagcgccccggctcgctcgcctcg
ctgggttccgtcagcggcgtcggcgagaacaagctcgcgaagtacggcgagcagatcctt
gcggtcgtcgcggaggacgacgccggctga
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