Streptomyces sp. CNQ-509: AA958_33675
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Entry
AA958_33675 CDS
T03968
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
strc
Streptomyces sp. CNQ-509
Pathway
strc03030
DNA replication
strc03430
Mismatch repair
strc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AA958_33675
03430 Mismatch repair
AA958_33675
03440 Homologous recombination
AA958_33675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strc03032
]
AA958_33675
03400 DNA repair and recombination proteins [BR:
strc03400
]
AA958_33675
Enzymes [BR:
strc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AA958_33675
DNA replication proteins [BR:
strc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AA958_33675
DNA repair and recombination proteins [BR:
strc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AA958_33675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AKH86361
LinkDB
All DBs
Position
7905305..7908847
Genome browser
AA seq
1180 aa
AA seq
DB search
MAKPPFTHLHVHTQYSLLDGAARLKDMFAACREMGMSHIAMTDHGNLHGAYDFFVQASAA
GVTPIIGIEAYVAPESRRNKRKVQWGQPHQKRDDVSGSGGYTHKTIWASSRTGLHNLFRL
SSDAYKEGWLQKWPRMDKEVIAEHAEGLIASTGCPSGEVQTRLRLGQFDEALAAAAWYQE
VFGKQRYFLELMDHGIEIERRVRDGLLEIGRKLGIPPLVTNDSHYTYAQEAGAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTEEMYAVDSSDAWQEGCANTLLVAEQIDTSGWFEKRD
LMPRFEVPDGYSEVTWFREEVWNGMRRRYPDGWDENYRKQAEYEMDVIVQMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVSYAMGITDLDPIEHGLIFERFLNPERVSMPDVDI
DFDERRRAEVIRYVTEKYGADKVAMIGTYGTIKAKNAIKDSARVLGYPYAMGDRITKAMP
ADVGGHGIDLAGITDPAHPRHAEAGEVRSMYENEPDVKKVIDTARGVEGLVRQMGVHAAG
VIMSSEPITDHVPVWVRHTDQVTITQWDYPTCESLGLLKMDFLGLRNLTIMDDAVKMVKQ
NKGRDIELLSLPLDDPRTFELLGRGDTLGVFQFDGSAMRSLLRLMRPDHFEDITAVTALY
RPGPMGMNSHINYALRKNGRQEITPIHPDLAEPLKEVLDITYGLVVYQEQVQKAAQVLAG
YSLGQADLLRRAMGKKKQEVLDKEFVPFRDGCRQRGYTDEAVQAVWDVLVPFAGYAYNKA
HAAAYALVSYWTAYLKANYPAEYMAALLTSVRDDKDKSAVYLNECRKMGIKVLPPDVNES
DANFTPRGDDTIVFGLTAVRNVGQNVVESIVRNRKAKGRYASFPDFLDKVDAVVCNKRTV
ESLIKAGAFDALGHTRKGLTAQYEPMIDNVVSVKRKEAEGQFDLFGGMGDEAAADEPGFG
LDVQFTDEEWEKSYLLAQEREMLGLYVSDHPLFGIEHVLGDRADASIAALNGGDHADGAI
VTIGGIISGLQRKMTKQGNAWAIATVEDLGGSLDCMFFPATYQLVSTQLVEDAIVFVKGR
LDKREDVPRLVAMELAVPDLSTAGERAAVRLDITEAQVTPESVARLKTVLQAHPGPSDVH
LRVRGRTRTTVYRLGHRIAPRPEFWADLKAAVAVTREPGA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
gtggccaagccgccttttacgcatctgcatgtgcacacgcagtattcgctgctggacggg
gcggcgcggttgaaggatatgttcgcggcgtgtcgtgagatggggatgtcgcatatcgcg
atgacggatcatgggaatcttcatggtgcgtatgacttctttgtgcaggcgtcggcggcg
ggggtgacgccgatcatcggtatcgaggcgtatgtggcgccggagtcgcggcggaacaag
cggaaggtgcagtgggggcagccgcatcagaagcgtgatgacgtgtcgggttccggtggg
tatacgcacaagacgatctgggcgtcttcccgtacgggtttgcataatttgttccggttg
tcgtccgatgcgtacaaggaggggtggctgcagaagtggccgcggatggacaaggaggtg
atcgcggagcatgcggaggggttgatcgcttctacggggtgtccttcgggtgaggtgcag
acgcggttgcggctggggcagttcgacgaggcgctggcggcggcggcgtggtatcaggag
gtgttcgggaagcagcggtatttcctggagttgatggatcacgggatcgagatcgagcgg
cgggtgcgggacgggctgctggagatcgggcggaagctggggattccgccgctggtgacg
aatgattcgcattacacgtatgcgcaggaggcgggggcgcatgatgcgttgctgtgtatt
cagacggggaagaatctttccgatccggatcggttcaggttcgatgggacgggttattac
ctgaagtcgaccgaggagatgtatgcggtcgattcgtcggacgcgtggcaggaggggtgt
gcgaacacgctgctggtggcggagcagatcgatacctcggggtggttcgagaagcgcgac
ctgatgccccgcttcgaggtccccgacggctacagcgaggtcacctggttccgtgaggaa
gtgtggaacggcatgcgccgccgctacccggacggctgggacgagaactaccgcaagcag
gccgagtacgagatggacgtcatcgtccagatggggttcccggggtacttcctggtggtc
gcggacttcatcatgtgggcgaagaacaacgggatcgcggtcggtcccggccgcggctcg
gcggcgggttcgatcgtgtcgtacgcgatggggatcacggacctggacccgatcgagcac
gggctgatcttcgagcggttcctgaatccggagcgggtgtcgatgccggatgtcgacatc
gacttcgacgagcgcaggcgggcggaggtgatccgctacgtcaccgagaagtacggtgcc
gacaaggtcgcgatgatcggcacgtacggcacgatcaaggcgaagaacgcgatcaaggac
tccgcgcgggtgctcgggtacccgtacgcgatgggcgaccggatcaccaaggccatgccc
gccgacgtcggcggccacggcatcgacctcgcgggcatcaccgaccccgcgcacccccgc
cacgccgaggcgggcgaggtccggtcgatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgcgcgcggcgtcgagggcctggtgcgccagatgggcgtgcacgcggccggc
gtgatcatgtccagcgagccgatcacggaccacgtcccggtctgggtgcgccacaccgac
caggtgacgatcacgcagtgggactacccgacctgcgaatcgctcggcctgctgaagatg
gacttcctcggcctgcgcaacctcaccatcatggacgacgccgtcaagatggtgaagcag
aacaagggccgggacatcgagctgctgtccctgccgctcgacgaccccaggaccttcgag
ctgctgggccgcggcgacaccctcggcgtcttccagttcgacggcagcgcgatgcgttca
ctgctccggctcatgcgccccgaccacttcgaggacatcaccgccgtcaccgccctctac
cggccgggtcccatgggcatgaactcgcacatcaactacgcgctgcgcaagaacggccgc
caggagatcaccccgatccacccggacctcgccgagccgctgaaggaagtcctcgacatc
acctacgggctcgtcgtctaccaggaacaggtgcagaaggccgcgcaggtgctcgccggc
tattcactgggccaggcggacctgctgcgccgggcgatgggcaagaagaaacaggaagtg
ctcgacaaggagttcgtccccttccgcgacggctgccggcagcgcggctatacggacgag
gcggtgcaggcggtctgggacgtgctggtgcccttcgccggctacgcgtacaacaaggcg
cacgcggcggcgtacgcgctcgtgtcgtactggacggcgtatctcaaggcgaactacccc
gccgagtacatggccgcgctgctgacgtccgtgcgcgacgacaaggacaagtccgcggtc
tatctcaacgagtgccggaagatgggcatcaaggtgctcccgccggatgtcaacgagtcc
gacgcgaacttcactccccgcggtgatgacacgatcgtgttcggtctgaccgccgtgcgc
aacgtcgggcagaacgtggtggagtcgatcgttcgcaaccgcaaggccaaggggcgctac
gcgtcgttccccgacttcctcgacaaggtcgacgccgtcgtctgcaacaagcgcaccgtc
gagtcgctgatcaaggcgggggcgttcgacgccctcgggcacacccgcaagggcctcacc
gcgcagtacgagccgatgatcgacaacgtggtgtccgtcaagcggaaggaggcggagggg
cagttcgacctcttcggcggcatgggcgacgaggcggcggcggacgagccgggcttcggg
ctcgacgtgcagttcacggacgaggagtgggagaagtcctatctgctcgcccaggagcgg
gagatgctcgggctctacgtctccgaccacccgctcttcggcatcgagcacgtcctgggc
gacagggccgacgcctccatcgcggcgctcaacggcggggaccacgccgacggggcgatc
gtcaccatcggcggcatcatctccggactgcagcgcaagatgaccaagcagggcaacgcc
tgggccatcgccaccgtcgaggacctcggcggctccctcgactgcatgttctttccggcc
acgtaccagttggtctccacccaactcgtcgaggacgccatcgtcttcgtcaagggacgg
ctcgacaagcgcgaggacgtgccccggctcgtcgccatggaactcgccgtccccgacctc
agcaccgcgggcgaacgcgccgccgtccgcctcgacatcaccgaggcccaggtcacgccc
gagtccgtggcccggctcaagaccgtgctccaggcccaccccggcccgtccgacgtgcac
ctgcgggtgcgcggccggacccgtacgacggtctaccgcctcggccaccgtatcgccccg
cgcccggagttctgggcggatctgaaggcggcggtcgcggtgaccagggagcccggcgcg
tag
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