Streptomyces sp. CCM_MD2014: NI25_03575
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Entry
NI25_03575 CDS
T04862
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
strd
Streptomyces sp. CCM_MD2014
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strd03400
]
NI25_03575
Enzymes [BR:
strd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
NI25_03575
DNA repair and recombination proteins [BR:
strd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
NI25_03575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AIV32725
UniProt:
A0A0N6W4S3
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All DBs
Position
779214..780710
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AA seq
498 aa
AA seq
DB search
MHWLFGDQLGPHFLTPGEGGPGPETRLLMIEARSVFRRRRFHRAKAHLVLSAMRHRAAEL
GDRVTYVRADTYRQGLERAARGRPVGVHHPTSHAALRLVRTLPGVTVGPARGFLVPLADF
TAWADGHGGRRLRQEDFYRWVRRGHDLLMDGEQPAGGRWNLDHDNREPPPREATSLQVGR
PYRPREDDIDEEVRDDLDRWEREGDVSFVGRDGPRLFPATRAEARRALRRFVERRLATFG
PYEDAMLAGDPAMSHSLLSSSLNLGLLDPAECVERAERAWREGLAPLNSVEGFVRQIAGW
REYVWQVYWYFGEDYRRSNTLRHTAPLPDWWSGLDADAVRANCLRTVLAQVRDTGWTHHI
PRLMMLGSHALQRGWDPAAVTDWFHRCFVDGYDWVMLPNVVGMSQYADGGRMTTKPYTSG
GAYVNRMSDFCGPCVYRPGERTGEHACPYTAGYWAFLDRHRELLAGNQRVARPVRQLDRL
GDLPEVLEQEHARGDTPP
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
gtgcactggctcttcggtgaccaactgggtccgcacttcctcacgccgggcgaaggggga
cccggaccggaaacccggttgctcatgatcgaggcgcgctccgtcttccggcggcgccga
ttccaccgggccaaggcccacctggtgctgtccgcgatgcgccaccgcgcggccgaactg
ggcgaccgcgtcacgtacgtgcgtgccgacacctaccgtcagggcctcgaacgggcggcg
cgcgggcgcccggtcggcgtccaccaccccacctcgcacgcggccctgcgcctggtgcgc
accctgcccggagtgacggtgggccccgcccgcggcttcctcgtgccgttggccgacttc
accgcctgggccgacggccacggcggcaggcgcctgcggcaggaggacttctaccgctgg
gtccgccgcgggcacgacctgctcatggacggcgagcagcccgcgggaggacggtggaac
ctcgatcacgacaaccgggaacccccgccccgcgaggccacctcactccaggtcggccgc
ccgtaccggccccgcgaggacgacatcgacgaggaggtccgcgacgacctcgaccgctgg
gagcgcgagggcgacgtttccttcgtcggacgggacgggccccgcctgttccccgccacc
cgggcggaggcgcgacgggcactgcggcgtttcgtcgaacgccggctcgccacgttcggg
ccctacgaggacgccatgctcgccggcgaccccgcgatgagccacagcctcctctcgtcc
tccctgaacctcggcctgctcgacccggccgagtgcgtcgaacgggcagagcgtgcctgg
cgcgagggtctggcgccgctgaacagcgtggagggcttcgtgcggcagatcgccggctgg
cgcgagtacgtctggcaggtgtactggtacttcggcgaggactaccggcgctccaacacg
ctccggcacaccgcgccgctgccggactggtggagcggcctggacgcggacgccgtgcgg
gcgaactgcctgcgcacggtcttggcccaggtgcgggacacgggctggacgcaccacatc
ccccgactgatgatgctcggcagtcacgcgctccagcggggctgggaccccgccgccgtc
acggactggttccaccgctgcttcgtggacggctacgactgggtcatgctccccaacgtc
gtcggcatgtcccagtacgccgacggcggccggatgaccaccaagccctacacgtcgggc
ggcgcgtacgtgaaccgcatgagcgatttctgcggcccgtgcgtctaccggccaggcgag
cgcaccggcgagcacgcgtgtccgtacaccgccggctactgggcgttcctcgaccggcac
cgggaactattggccggcaatcagcgcgtggcccggccggtgcggcagttggaccggctc
ggcgaccttccggaggtactcgaacaggagcatgcgcggggtgacacaccgccttga
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