Streptomyces sp. CCM_MD2014: NI25_06320
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Entry
NI25_06320 CDS
T04862
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
strd
Streptomyces sp. CCM_MD2014
Pathway
strd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NI25_06320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strd03400
]
NI25_06320
Enzymes [BR:
strd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NI25_06320
DNA repair and recombination proteins [BR:
strd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NI25_06320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AIV33192
LinkDB
All DBs
Position
complement(1478277..1479056)
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AA seq
259 aa
AA seq
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MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKVAEAQFPFDELREAGYKAAVHATG
RWNGVAVLSRVGLEDVVKGLPGDPGYEGVQEPRAVSATCGPVRVWSVYVPNGREVEHPHY
AYKLQWLEALRAALQSDASGDRPFAVMGDYNIAPTDDDVYDRAAFEGATHVTPAERAALA
SLRGAGLSDVVPRPLKYDHPYTYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVTDSYVDRE
ERKGKGASDHAPVVVDLEL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgcgacctggaacgtgaactcgatcaccgcccgcctgccgaggctgctggcc
tggctggagagcagcggcaccgacgtgctctgtctccaggaggccaaggtcgccgaggcg
cagttccccttcgacgagctgcgcgaggcgggctacaaggcggcggtccacgccaccggc
cggtggaacggggtggcggtgctctcccgcgtgggcctcgaggatgtggtcaagggcctg
cccggcgatccgggctacgagggcgtccaggagccgcgcgccgtctcggccacctgcggt
ccggtccgcgtctggtcggtgtacgtgcccaacggccgcgaggtggagcacccgcactac
gcctacaagctccagtggctcgaggccctgcgcgccgccctccagagcgacgcctccggc
gaccgccccttcgccgtgatgggtgactacaacatcgcgccgaccgacgacgacgtctac
gaccgcgccgccttcgagggcgccacccacgtcacccccgccgagcgcgccgccctcgcc
tccctgcgcggcgccggcctgtccgacgtggtcccgcgcccgctgaagtacgaccacccc
tacacgtactgggactaccgccagctctgcttccccaagaaccgcggcatgcgcatcgac
ctggtgtacgggaacgagcccttcgccaaggcggtcaccgactcctacgtcgaccgtgag
gagcgcaagggcaagggagcctcggaccacgcgccggtcgtggtggacctggagctgtaa
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