Streptomyces sp. CCM_MD2014: NI25_08040
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Entry
NI25_08040 CDS
T04862
Name
(GenBank) ribonuclease
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
strd
Streptomyces sp. CCM_MD2014
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strd03019
]
NI25_08040
03016 Transfer RNA biogenesis [BR:
strd03016
]
NI25_08040
Enzymes [BR:
strd01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
NI25_08040
Messenger RNA biogenesis [BR:
strd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NI25_08040
Transfer RNA biogenesis [BR:
strd03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
NI25_08040
Prokaryotic type
NI25_08040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
AIV33450
UniProt:
A0A0N6ZFY8
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All DBs
Position
1842999..1843388
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AA seq
129 aa
AA seq
DB search
MRFPPRITRIGAAAALLSALLVGATVATASPAAAAVGSICYSDLPSQAYDTLELIEQGGP
FPYSQDGTVFQNREGVLPSQSSGYYHEYTVITPGSSTRGARRIVTGEENQEDYYTADHYE
SFDLVDYGC
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgagattccccccacgaatcactcgcatcggcgccgcagccgccctactgtccgcgctc
ctcgtcggagccaccgtagccaccgcctccccggcggccgccgcggtgggcagcatctgc
tacagcgacctgccctcccaggcgtacgacaccctcgaactgatcgagcagggtggcccc
ttcccgtactcgcaggacggcaccgtcttccagaaccgggaaggcgtcctgccgagccag
tcctctggctactatcacgagtacacggtgatcaccccgggctcctccacgcgcggtgct
cggcgcatcgtcaccggtgaggagaaccaggaggactactacacggccgaccactacgag
tccttcgacctggtcgactacggctgctga
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