Streptomyces sp. CCM_MD2014: NI25_08945
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Entry
NI25_08945 CDS
T04862
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
strd
Streptomyces sp. CCM_MD2014
Pathway
strd03030
DNA replication
strd03430
Mismatch repair
strd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NI25_08945
03430 Mismatch repair
NI25_08945
03440 Homologous recombination
NI25_08945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strd03032
]
NI25_08945
03400 DNA repair and recombination proteins [BR:
strd03400
]
NI25_08945
Enzymes [BR:
strd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NI25_08945
DNA replication proteins [BR:
strd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NI25_08945
DNA repair and recombination proteins [BR:
strd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NI25_08945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AIV33604
LinkDB
All DBs
Position
complement(2069889..2070623)
Genome browser
AA seq
244 aa
AA seq
DB search
MGWHRELLIGFDLETTGTDPREARIVTGAVIEVRGSQPLGRREWLADPGVEIPADAVAVH
GISNERAAGEGRPADQVADAIAEVLADHWKAGVPVVAYNAAFDLTLLSAELRRHGLPSLR
ERLGGLDPAPVIDPYTIDRAVDRYRRGKRNLEAVCREYGVPLDAAHDATADALAAARLAC
AIAGRHPKVAALGPADLHRRQVEWYAEWAADFQSFLRRKGDATAVVDGTWPLREPSGAPA
DERV
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgggctggcaccgcgagctgctgatcggcttcgacctggagacgacgggcaccgatccg
cgcgaggcgcgcatcgtcacgggagccgtgatcgaggtcaggggctcgcagccgctcggc
cggcgggagtggctggccgaccccggcgtggagatcccggcggacgcggtggcggtccac
ggcatcagcaacgaacgcgcggccggtgagggccgccccgccgaccaggtcgcggacgcc
atcgccgaagtcctcgcggaccactggaaggccggcgtcccggtcgtcgcctacaacgcg
gccttcgacctcaccctgctctccgccgaactgcggcgccacgggctgccgtccctgcgc
gagcgcctcggcggcctcgaccccgccccggtcatcgacccgtacaccatcgaccgtgcc
gtcgaccgctaccgcaggggcaaacggaacctggaagccgtctgccgggagtacggagtc
ccgctcgacgccgcccacgacgccacggccgacgccctcgccgcggcccggctggcctgc
gcgatagccggccgccaccccaaggtcgcggccctcggcccggcggacctgcaccgccgc
caggtcgagtggtacgccgagtgggcggcggacttccagagcttcctgcgccgcaagggc
gacgccacggccgtcgtcgacgggacctggccgctgcgcgagccgtccggggcaccggcc
gacgagcgggtctga
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