Streptomyces sp. CCM_MD2014: NI25_11330
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Entry
NI25_11330 CDS
T04862
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
strd
Streptomyces sp. CCM_MD2014
Pathway
strd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NI25_11330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strd03019
]
NI25_11330
03009 Ribosome biogenesis [BR:
strd03009
]
NI25_11330
03036 Chromosome and associated proteins [BR:
strd03036
]
NI25_11330
Enzymes [BR:
strd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
NI25_11330
Messenger RNA biogenesis [BR:
strd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NI25_11330
Ribosome biogenesis [BR:
strd03009
]
Eukaryotic type
90S particles
RNase
NI25_11330
Prokaryotic type
rRNA processing factors
NI25_11330
Chromosome and associated proteins [BR:
strd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
NI25_11330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AIV34004
LinkDB
All DBs
Position
complement(2659146..2659964)
Genome browser
AA seq
272 aa
AA seq
DB search
MSVPKKAEDAKADPPAKKKADTQASSHTLLEGRLGYQLESALLVRALTHRSYAYENGGLP
TNERLEFLGDSVLGLVVTDTLYRTHPDLPEGQLAKLRAAVVNSRALAEVGRGLELGSFIR
LGRGEEGTGGRDKASILADTLEAVIGAVYLDQGLDAASELVHRLFDPLIEKSSNLGAGLD
WKTSLQELTATEGLGVPEYLVTETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAE
SAWRSIRAAADERAKATADAVDVDPDEASASA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagtccccaagaaggcggaagacgccaaggcggacccacccgccaagaagaaggcg
gacacccaggcctcgtcccacacgcttctggaagggcggctcggctaccagctcgagtcc
gcccttctggtgcgcgcactgacccaccgttcctacgcgtacgagaacggcggtctgccg
acgaacgagcggctggagttcctcggtgactccgtcctcggcctcgtcgtcacggacacg
ctgtaccgcacccaccccgacctgcccgaaggccagctggccaagctgcgggccgcggtg
gtcaactcgcgtgcgctggcggaggtgggccgcgggctcgaactcggctccttcatccgg
ctcggacgcggtgaagagggcacgggcggccgggacaaggcgtccatcctcgccgacacc
ctcgaagcggtgatcggcgcggtctatctcgaccagggcctcgacgcggcctccgaactg
gtgcaccgcctgttcgacccgctgatcgagaagtcctcgaacctcggtgccggcctggac
tggaagaccagcctccaggagctcaccgcgaccgaagggctcggcgtccccgagtacctg
gtcacggagaccggccccgaccacgagaagaccttcactgctgccgcccgcgtcggaggc
gtctcgtacggcaccggcaccggccgcagcaagaaggaggcggagcagcaggccgcggaa
tccgcgtggcggtccatccgggccgcggcggacgagcgcgccaaggcgacggccgacgcc
gtcgacgtggaccccgacgaggcgtccgcctccgcctga
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