Streptomyces sp. CCM_MD2014: NI25_12640
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Entry
NI25_12640 CDS
T04862
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
strd
Streptomyces sp. CCM_MD2014
Pathway
strd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NI25_12640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strd03400
]
NI25_12640
DNA repair and recombination proteins [BR:
strd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
NI25_12640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
AIV38668
LinkDB
All DBs
Position
complement(2946288..2947385)
Genome browser
AA seq
365 aa
AA seq
DB search
MRSIWNGAISFGLVSIPIKLVNATESHAVSFRQIHTEDGGRIRYRKVCELEDREVTQAEI
GKAYEDADGSMIPITDEDLSQLPIPTARTIEIVAFVPEDRIDPLQMGSAYYLAASGAPAA
KPYTLLREALKRSNRVAIAKFALRGRERLGMLRVVGDAIAMHGLLWPDEVRAPEGVAPEG
GVTVRDQELDLADALMDTLGEIDLDDLHDEYREAVEEVVAAKAAGERPPEAREEAAPGKV
LDLMAALENSVRAARESRDGEETAPAEEAEVRPLQQRKTSSRRAPKETGGKKSTSTAAKK
TAAKKAEPKKSTAKSRTSASTSASAKKTAAKGAAKKAAGRSAAKETAKSTGRSTAKKTAS
RRRSA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
gtgcgatccatctggaacggcgccatctccttcggcctggtcagcatcccgatcaaactg
gtgaacgcgaccgagagccacgcggtctccttccgccagatccacacggaggacggcggc
cggatccgctaccgcaaggtgtgcgaactggaggaccgcgaggtcacccaggccgagatc
ggcaaggcctacgaggacgccgacggctcgatgatcccgatcaccgacgaggacctgtcc
cagcttcccatcccgacggcccgcacgatcgagatcgtggccttcgtgcccgaggaccgc
atcgacccgctccagatgggctcggcctactacctcgcggcgagcggcgcccccgccgcc
aagccgtacacgctgctgcgcgaggcgctcaagcgcagcaaccgggtcgcgatcgccaag
ttcgccctgcgcggccgggagcgcctcggcatgctccgggtcgtcggcgacgccatcgcg
atgcacggcctgctgtggccggacgaggtgcgggcccccgagggcgtcgcgccggagggc
ggcgtcaccgtgcgtgaccaggaactggacctcgcggacgccctcatggacacgctcggc
gagatcgacctggacgacctgcacgacgagtaccgcgaggccgtcgaggaggtcgtcgcc
gccaaggccgccggcgagcgtcccccggaggcgcgcgaggaggcggcacccgggaaggtg
ctcgacctgatggccgcgctggagaacagcgtgcgggcggcccgcgagtcccgggacggc
gaggagaccgcgccggccgaggaggccgaggtcagaccgctgcagcagcgcaagacctcg
tcccgccgggcccccaaggagaccggcggcaagaagtcgacctccactgccgcgaagaag
acggcggcgaagaaggcggagccgaagaagtcgacggccaagtcccgcacgtccgcgtcc
acgtccgcgtccgcgaagaagacggcggccaagggcgccgccaagaaggccgccggccgc
agcgcggccaaggagaccgccaagagcacgggcaggagcaccgccaagaagacggcgtcc
cgcaggcgcagcgcctga
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