Streptomyces sp. CCM_MD2014: NI25_13255
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Entry
NI25_13255 CDS
T04862
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
strd
Streptomyces sp. CCM_MD2014
Pathway
strd03420
Nucleotide excision repair
strd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NI25_13255
03430 Mismatch repair
NI25_13255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strd03400
]
NI25_13255
Enzymes [BR:
strd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NI25_13255
DNA repair and recombination proteins [BR:
strd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NI25_13255
MMR (mismatch excision repair)
Other MMR factors
NI25_13255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AIV34339
UniProt:
A0A0N6ZI71
LinkDB
All DBs
Position
complement(3087814..3091329)
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AA seq
1171 aa
AA seq
DB search
MPAHLTDPEQLKELLGIPFTPEQTACIVAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALIRAGVTDPDAIDPDHPPGEPAISTYHAFAGRLL
TDHGLRLGLEPTSRLLADATRYQLAARVLREAPGPYPALTRSFADLVSDLLALDAELAEH
LVHPEDLLTWDARLLDTLEGVRLSNADLRKVPEAAAARRALADLVIRYRAAKRRQDLLDF
GDQIALSARLAGLPEVGRILRDEYRVVLLDEYQDTSVAQRILLAGLFGGGTGHPVTAVGD
PCQAIYGWRGASVANLDDFPEHFAHADGRPAARQALSENRRSGGRLLELANGLAEPLRAM
HAGVEALRPAPGAERDGTVRCALLRTHAEEIDWIADSVAHLVRTGTAPGEIAVLCRTATD
FAEIQGALVARDVPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRLLSGPRWRIG
PRDLALLGRRARLLVSHARVAGDDDPDRRLAEAVEGVDPSEVISLADALDTFLETPLDGT
GDDDGLPFSPDARVRFARLATELRELRRALSDPLMDVLHRVLAVTGLEVELSASPHALAA
RRRETLSNFLDVAASFAAGDNEATLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAHK
SKGLEWDVVAVPGLVTGTFPSGQGREKWTAQGKVLPHGLRGDAETLPDVASWDSRGLKAF
HEAMKDHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKKPRGPSDFLTALYEHCAAGHG
EIEAWADEPAEDEENPALHRATADEVWPLPLDDEALARRRAAAETVLAHLDALATRREGP
SAAPDTCDDPDWPPPPEDDEAPPEEADPDGAGDPADWNTWTTGRPTADPDRPVAADRTAD
RMGGPAVPRQATPAERHQGGAPVPAPARLTPEEARTVASWDRDLDALTGELLRARESVTE
VPLPASLTASQLLSLAADPDGFAQELARPMPRPPQPAARRGTRFHAWVEARFEALKLPLL
EPEELPGGDAEIADEQDLEFLKDAFERTEYARRTPFRVEAPFQLSLAGRVVRGRIDAVYK
EGDGESATYEIVDWKTNRAATADPLQLALYRIAWAEQQGVPPTSVTAAFLYVRTGEVVRP
EGLPDRTALEKLLLAEPVGDEPHDRGARAGR
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcccacctcaccgatcccgagcagctcaaggagctcctcggcatccccttcacc
ccggagcagacggcctgcatcgtcgcgccgcccgccccgcaggtgatcgtggccggagcc
ggatcgggcaagacgacggtgatggcggcacgcgtggtctggctggtcggcaccggccag
gtcgcaccggaacaggtcctcggcctcaccttcaccaacaaggcggccggcgaactcgcc
gaacgcgtccgcaaggccctgatccgggccggcgtgaccgatccggacgcgatcgacccg
gaccacccgccgggcgagccggcgatctcgacctaccacgccttcgccggccgcctcctc
accgaccacggcctgcgcctcgggctggaaccgacctcccgcctgctcgccgacgccacc
cgctaccagctcgccgcgagggtcctgcgcgaggctcccggcccctaccccgcgctcacc
cggtccttcgccgacctggtcagcgacctcctcgccctcgacgccgaactcgccgagcac
ctcgtacaccccgaggacctgctcacctgggacgcccgcctcctggacaccctggagggc
gtccggctcagcaacgccgacctgcgcaaggtccccgaggccgccgccgcccgccgcgca
ctggccgacctggtgatccgctaccgggccgccaaacgccggcaggacctgctggacttc
ggcgaccagatcgccctgtccgcacggctcgccgggctccccgaggtcggccgcatcctg
cgcgacgagtaccgggtggtgctgctcgacgagtaccaggacacctcggtggcccagcgc
atcctcctggcgggcctgttcggcggcggcaccggccatcccgtgaccgccgtgggcgac
ccctgccaggcgatctacggctggcgcggcgcctccgtcgccaacctcgacgacttcccc
gaacacttcgcccacgccgacggacggcccgcggcccgtcaggcgctcagcgagaaccgc
cgcagcggcggccgcctcctcgagctggccaacggcctcgccgagcccctgcgcgccatg
cacgcgggtgtggaggccctgcggcccgccccgggcgccgaacgcgacggcacggtccgc
tgcgccctgctgcgcacccacgccgaggagatcgactggatcgccgactccgtcgcccac
ctcgtacgcaccggcacggcgcccggcgagatcgccgtcctgtgccgcaccgcgaccgac
ttcgccgagatccagggcgcgctggtggcgcgcgacgtccccgtcgaggtcgtcggcctg
tccgggctgctgcacctgcccgaggtcgccgacctggtcgccgtctgcgaggtcctccag
gacccgggtgccaacgcctccctggtccggctgctctccggcccgcgctggcgcatcggc
ccgcgcgacctcgccctcctgggccgtcgcgcccggctgctcgtgagccacgcgcgcgtg
gcgggcgacgacgaccccgaccgcaggctcgccgaggccgtggaaggagtcgacccgtcc
gaggtgatatcgctcgcggacgccctcgacaccttcctggagacgccgctggacggcacc
ggggacgacgacgggctgcccttctcaccggacgcgcgcgtgcggttcgcgcggctggcc
accgagctgcgcgagctgcgccgggccctgtccgatccgctcatggacgtcctgcaccgc
gtcctcgccgtcaccggtctggaggtggagctgtcggcctccccgcacgccctggccgcc
cgccgccgcgagaccctgtccaacttcctcgacgtcgccgcctccttcgccgccggcgac
aacgaggccaccctgctggccttcctgggcttcctgcgcaccgcggcgcagtacgagaag
gggctggacaacgcgctgcccggcggggagaacaccgtcaaggtgctcaccgcgcacaag
tccaagggcctcgagtgggacgtggtcgccgtgcccggcctcgtcaccggcaccttcccc
agcggccagggccgcgagaagtggaccgcccagggcaaggtgctgccgcacggcctgcgc
ggcgacgccgagaccctgcccgacgtcgcctcctgggactcccgcggcctgaaggccttt
cacgaggccatgaaggaccaccagcacaccgaggagctccgcctcggctacgtcaccttc
acccgcccccgctccctgctcctcggctccggccactggtggggacccagccagaagaag
ccccgcggaccgtccgacttcctcacggccctgtacgagcactgcgccgccggacacggc
gagatcgaggcctgggcggacgaaccggccgaggacgaggagaacccggccctgcaccgg
gcgaccgccgacgaggtctggcccctgcccctggacgacgaggcactcgcccggcgccgg
gccgccgcggagacggtcctcgcccacctggacgccctcgccaccaggcgggaaggccct
tccgcggcccccgacacctgcgacgacccggactggccgccgcccccggaggacgacgag
gcgcccccggaggaagcggatcccgacggggccggggaccccgccgactggaacacctgg
accacgggccgccccaccgccgacccggatcgacccgtggccgcggaccgtaccgccgac
cgcatgggcggccccgccgtcccgcgccaggcgacacccgccgagcggcatcaaggcggc
gcccccgttcccgcccccgcgcgcctcaccccggaggaggcccgtaccgtcgcctcctgg
gaccgcgacctcgacgcgctcaccggggagctcctgcgcgcccgcgagagcgtcaccgag
gtgccccttccggcctcgctgaccgcctcccagctgctgagtctggccgccgacccggac
gggttcgcccaggagctggcccggcccatgccccgcccgccccagcccgcggcccgccgg
ggcacccgtttccacgcctgggtggaggcccggttcgaagcactgaagctgcccctgctg
gaaccggaggagctgccgggcggcgacgcggagatcgccgacgaacaggacctggagttc
ctgaaggacgccttcgaacgcaccgagtacgcccgccgcacaccgttccgcgtcgaggcg
cccttccagctctcgctggccggccgggtcgtacgcggccgcatcgacgccgtctacaag
gagggcgacggggagtccgcgacgtacgagatcgtcgactggaagacgaaccgcgccgcc
accgccgacccgctccagctcgcgctctaccgcatcgcctgggccgagcagcagggcgtg
ccgcccacctcggtgacggccgccttcctgtacgtacgcaccggagaggtcgtacggccc
gaggggctgccggaccgtacggcgctcgagaagctgctgctggccgagccggtcggtgac
gaaccgcacgaccggggtgcccgcgcgggccgatag
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