Streptomyces sp. CCM_MD2014: NI25_14880
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Entry
NI25_14880 CDS
T04862
Name
(GenBank) DNA-directed RNA polymerase subunit sigma-24
Organism
strd
Streptomyces sp. CCM_MD2014
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Gene cluster
GFIT
Motif
Pfam:
HTH_3
Sigma70_r4_2
HTH_31
HTH_19
Sigma70_r4
HTH_24
HTH_AsnC-type
MerR
Motif
Other DBs
NCBI-ProteinID:
AIV34626
UniProt:
A0A0N6ZIS0
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Position
3458937..3460163
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AA seq
408 aa
AA seq
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MTRSPATPLPSPKARRRLRETAALTQTQLAERVGVAPGTVRAWESGRTTPRGRKREAYAK
LLKTLAEEEAARQATQTPEPAPPHETEPAPDQASGPGAGPGAEAGPEPVPKQEPAPEPQP
ESASEPARDSAPGPVPEPRPAPTPLTPAQAFDALYEFSAPALLRQTFLLTGRREQARESV
ERAFQTAWERWPEVARDRDPVGWVRATAYEYALSPWQRFRPRHRHPEPPPADPGDRTLLN
TLLRLPPRHRRTLVLYDGVGLDLPETAAETEASTPAAAHRLLRAREAVADRLPALADPQV
LHQRLAELASNERLGAARPPSVRRGGERRARFRTRAAIAFTVALIGTTALTVRTAPTHYE
PPVSPGQAVRGVPPRVAPGSLSDEELELRQKLRDQLQDGPERLSPRLE
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgcagccccgcgactccgcttccctcccccaaggcgcgccgacgcctgcgggag
accgcggcgctgacacagactcagctggcggaacgggtgggcgtcgctcccgggacggtc
cgcgcgtgggagagcggccgtacgactccgcgaggccgcaagcgcgaggcgtacgcgaag
ctgctgaagacgctggccgaggaagaggcggcacggcaggcgacgcagacgccggagccg
gcaccaccgcacgagacggaaccggcacctgaccaggcatcaggaccgggagccggcccg
ggagctgaagcaggcccggagccggtgccgaagcaggagccggcgcccgagccgcaaccc
gaatcggcttccgaaccggcccgcgattcggcccccggccccgtccccgagccgcgcccc
gcgcccaccccgctgacgcccgctcaggccttcgacgcgctgtacgagttcagtgcgccc
gcccttctgcgccagaccttcctgctgacgggccgtcgggagcaggcgcgcgagtcggtg
gagcgggcgttccagacggcctgggagcgctggcccgaggtggcccgcgaccgggacccg
gtgggctgggtgcgggcgacggcgtacgagtacgcgctctcgccctggcaacgcttccgc
ccgcgccaccggcacccggagccgccgcccgccgaccccggcgaccgcaccctgctgaac
accctgctcagacttcccccgagacaccgccgcacgctcgtgctgtacgacggtgtgggc
ctggacctgcccgagacggcggcggagacggaggcgagcaccccggcggcggcccaccgg
ctgctgcgcgcccgcgaggccgtcgccgaccgcctccccgcactggccgacccgcaggtg
ctgcaccagcggctggccgaactggcgtcgaacgagcggctgggcgcggcacggccgccg
tcggtgcgcaggggcggcgaacgccgggcgaggttccggacccgggcggccatcgccttc
acggtcgccctcatcgggaccacggccctgaccgtacgtaccgcgcccacgcactacgaa
ccacccgtgtcccccgggcaggcggtacgcggggtgccgcccagggtggcgccgggctcc
ctgtcggacgaggagctggagctgcggcagaagctgcgggaccagttgcaggacgggccg
gagcggctgagccctcggctcgaatga
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