Streptomyces sp. CCM_MD2014: NI25_14940
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Entry
NI25_14940 CDS
T04862
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
strd
Streptomyces sp. CCM_MD2014
Pathway
strd03420
Nucleotide excision repair
strd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NI25_14940
03430 Mismatch repair
NI25_14940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strd03400
]
NI25_14940
Enzymes [BR:
strd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NI25_14940
DNA repair and recombination proteins [BR:
strd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NI25_14940
MMR (mismatch excision repair)
Other MMR factors
NI25_14940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIV34635
LinkDB
All DBs
Position
complement(3477305..3479794)
Genome browser
AA seq
829 aa
AA seq
DB search
MSSLFDDSFLASLQTPRGHEEEPPPPPEGDHGPEPVPHDLFGGKFDVPPDRDTHYRDGAP
RPALDPAALLEGLNENQRAAVVHSGSPLLIVAGAGSGKTRVLTHRIAHLLAERGVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYAM
YQARLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGGASEHPVDVPPEAEVPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQ
NYRSTQTILSAANAVIERNESRRPKNLWTNQGSGARITGYVADTEHDEAQFVADEIDRLT
DAGEAKAGDVAVFYRTNAQSRVFEEVFIRTGLPYKVVGGVRFYERKEVRDVLAYLRVLAN
PEDSVPLRRILNVPKRGIGDRAEAMIDALSQREKISFPQALRRVDEAYGMAARSANAVKR
FNTLMEDLRTVVESGAGPATVLEAILERTGYLAELQASTDPQDETRIENLQELAAVALEF
EQERAEGEEAGTLADFLEKVALVADSDQIPDEEDGDGVVTLMTLHTAKGLEFPVVFLTGM
EDGVFPHMRALGQAKELEEERRLAYVGITRARERLYLTRSTLRSAWGQPSYNPPSRFLEE
IPAPHLEWKRTGANGPAPSAPVSGVAASLSSSRSRSSASGVSGFATRRSAGAEQPTVSLA
VGDRVTHDQFGLGTVVGVKGTGSNAEATIDFGDTKPKRLLLRYAPVEKL
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcgagcctccagaccccccggggtcacgag
gaggaacctccgccgccgcccgagggcgatcacggaccggagccggttccgcacgatctg
ttcggcgggaagttcgacgtgcctccggaccgggacacccactaccgggacggcgccccg
cgcccggccctggacccggccgccctcctggaagggctgaacgagaaccagcgggccgcc
gtcgtccactccggctccccgctgctcatcgtggccggtgccggctccggcaagacccgc
gtgctcacccaccgcatcgcccacctgctggccgagcgcggcgtccacccgggccagatc
ctcgcgatcaccttcaccaacaaggccgcgggcgagatgaaggagcgcgtggagcagctc
gtcggcccgcgcgccaacgcgatgtgggtgatgaccttccacagcgcgtgcgtgcgcatc
ctgcgccgcgagtcgaagaagctcggcttcacctcgtcgttctcgatctacgacgccgcc
gactccaagcggctcatggcactggtctgccgcgacctggacctggaccccaagcgcttc
ccacccaagtcgttcagtgcgaagatcagcaacctgaagaacgagctgatcgacgaggag
gacttcgccgcccaggccgccgacggcttcgagaagaccctcgcccaggcctacgccatg
taccaggcacggctgcgcgaggccaacgccctcgacttcgacgacctgatcatgacgacg
gtcaacctgctccgcgccttcccggacgtcgccgagcactaccgccgccgcttccgccac
gtcctggtcgacgagtaccaggacaccaaccacgcccagtacgccctggtgcgcgagctg
gtcggcggggcctcggagcaccccgtcgacgtgccgcccgaggccgaggtgccgcccgcc
gagctgtgcgtggtgggcgacgccgaccagtcgatctacgccttccgcggcgccaccatc
cgcaacatcctccagttcgaggaggactacccggacgcgacgacgatcctgctcgagcag
aactaccgctccacgcagaccatcctcagcgccgccaacgcggtcatcgagcgcaacgag
tcacgccgtcccaagaacctgtggaccaaccagggcagcggcgcgcggatcaccggatac
gtcgccgacaccgagcacgacgaggcgcagttcgtcgccgacgagatagaccgcctcacc
gacgcgggcgaggccaaggcgggcgacgtcgcggtgttctaccggaccaacgcccagtcc
cgtgtcttcgaagaggtcttcatccgcaccggcctgccctacaaggtcgtcggcggcgtc
cgcttctacgagcgcaaggaggtccgggacgtcctggcctacctgcgggtgctggccaac
ccggaggactcggtgccgctgcgccgcatcctcaacgtccccaagcgcggcatcggtgac
cgcgcggaggcgatgatcgacgccctctcccagcgcgagaagatcagcttcccgcaggcg
ctgaggcgcgtcgacgaggcgtacggcatggccgcgcgttcggcgaacgccgtcaagcgg
ttcaacaccctcatggaggatctccgcaccgtcgtcgagtccggcgccggaccggcgacg
gtcctcgaggcgatcctcgaacgcaccgggtacctggcggagttgcaggcctccaccgac
ccgcaggacgagacccgcatcgagaacctccaggaactcgcggccgtcgccctggagttc
gaacaggagcgtgccgagggcgaggaggccgggacactggccgacttcctggagaaggtc
gcgctcgtcgcggactccgaccagatccccgacgaggaggacggcgacggcgtcgtcacc
ctgatgaccctgcacaccgccaagggcctggagttcccggtcgtcttcctcaccggcatg
gaggacggcgtgttcccgcacatgcgcgccctcggccaggccaaggagctggaggaggag
cgccgcctcgcctacgtcggcatcacccgcgcccgcgaacgcctctacctgacccggtcg
acgctgcgcagcgcctggggccagccgtcgtacaacccgccctcgcggttcctggaggag
attccggcgccccacctggagtggaagcgcaccggggcgaacggccccgcgccctccgcg
ccggtctcgggcgtggcggcctcgctgtcctcgtcccgttcccgttcctcggcgtcgggc
gtgtccggcttcgccacccgccggtcggccggcgccgagcagccgacggtctcgctggcg
gtcggcgaccgcgtcacgcacgaccagttcgggctcggcacggtggtcggggtcaagggc
accgggtccaacgccgaggcgacgatcgacttcggggacaccaagccgaagcggctgctg
ctgcggtacgcgccggtggagaagctctga
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