Streptomyces sp. CCM_MD2014: NI25_15300
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Entry
NI25_15300 CDS
T04862
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
strd
Streptomyces sp. CCM_MD2014
Pathway
strd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NI25_15300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strd03021
]
NI25_15300
03400 DNA repair and recombination proteins [BR:
strd03400
]
NI25_15300
Enzymes [BR:
strd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NI25_15300
Transcription machinery [BR:
strd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NI25_15300
DNA repair and recombination proteins [BR:
strd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NI25_15300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
AbiEi_4
Motif
Other DBs
NCBI-ProteinID:
AIV34704
UniProt:
A0A0N6ZIZ9
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All DBs
Position
complement(3563652..3564674)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNAKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgttgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtcatcgagccgctggagccgggcttcggctacaccctcggcaactccctccgccgc
accctcctctcgtcgatccccggcgctgctgtcaccagcatccgcatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctgatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagcccgtcgtgatgtacctgcgcaagcag
ggcccgggtctggtcaccgccgccgacatcgcgcccccggccggtgtcgaggtgcacaac
cccgacctcgtcctggccacgctcaacgccaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtgcagaacaagcaggtgggccaggagatcggc
cgtatcccggtcgactcgatctactcgccggttctcaaggtcacgtacaaggtcgaggcc
acgcgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgtccccgcgacgccatggcttccgccggcaagaccctggtcgagctgttcggt
ctcgcccgcgagctgaacatcgacgccgagggcatcgacatgggtccgtccccgacggac
gccgcgctggccgccgacctggcgctgccgatcgaggagctggagctcaccgttcggtcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtggcccgttccgag
gcggacctgctcgacatccgcaacttcggcgcgaagtcgatcgacgaggtcaaggccaag
ctcgcgggcatgggcctggcgctcaaggactcgcctcccgggttcgacccgaccgccgcg
gcggacgcgttcggcgcggacgacgacgcggacgcgggcttcgtcgagaccgagcagtac
tga
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