Streptomyces sp. CCM_MD2014: NI25_16190
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Entry
NI25_16190 CDS
T04862
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
strd
Streptomyces sp. CCM_MD2014
Pathway
strd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NI25_16190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strd03019
]
NI25_16190
03400 DNA repair and recombination proteins [BR:
strd03400
]
NI25_16190
Enzymes [BR:
strd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NI25_16190
Messenger RNA biogenesis [BR:
strd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NI25_16190
DNA repair and recombination proteins [BR:
strd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NI25_16190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
AIV34855
UniProt:
A0A0N6W5D6
LinkDB
All DBs
Position
complement(3721014..3723038)
Genome browser
AA seq
674 aa
AA seq
DB search
MGGTGVIGEMTGTEPVRDGDSEALATLHRVFGYDAFRGEQEAIVEHVIAGGDAVVLMPTG
GGKSLCYQIPSLVRPGTGIVVSPLIALMQDQVDALRALGVRAGFMNSTQDFDERRVTEAE
FLAGELDLLYLAPERLRLDSTLDLLSRGKISLFAIDEAHCVSQWGHDFRPDYLALSLLGE
RWPDVPRLALTATATDATHREITERLDMPAARHFVASFDRPNIQYRIVPKSDPKKQLLSF
LRQEHPGDAGIVYCLSRNSVEKTAEFLSRNGVEAVPYHAGLDAGTRAAHQSRFLREEGLV
VVATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWMAYGLNDVIQQR
KLIQSGEGDEVFRRRAQSHLDAMLALCETARCRRGQLLAYFGQEPDGAGCGNCDTCLTPP
ETWDGTVAAQKVLSTVVRLKRERGQKFGAGQIIDILLGKRTAKVIQFDHDQLSVFGIGEE
LTEGEWRGVARQLLAQGLLAVEGEYGTLVLTEASGEVLRREREVPLRKEPKKPAAARSAG
GGRGERKAKAAAAELPAELVPAFEALRAWRAEQAREQGVPAYVIFHDATLREIATVWPTS
VAQLGGISGVGEKKLATYGEGVVGVLAGLEGPDSAPAPTPAPAHEPAPADGSGTGSRAYD
GADDWPDHEPEDWI
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggacgggcgtgatcggcgagatgacagggacggagccggtgagggacggggac
agcgaggcgctggccaccctgcaccgggtcttcgggtacgacgccttccgcggcgagcag
gaggcgatcgtcgagcacgtgatcgccggcggtgacgccgtcgtgctcatgccgaccggt
ggcggaaagtccttgtgctaccagatcccgtccctggtcaggcccggcaccggcatagtg
gtctcgccgctgatcgcgctgatgcaggaccaggtcgacgcgctgcgggcgctcggcgtg
cgggccgggttcatgaactccacgcaggacttcgacgagcggcgcgtgaccgaggccgag
ttcctcgccggcgagctggacctgctgtacctggcgcccgagcggctgcgcctggacagc
accctcgacctgctctcccgcggcaagatctccctcttcgccatcgacgaggcgcactgc
gtgtcgcagtggggccacgacttccggcccgactacctcgccctgtccctgctcggcgag
cgctggccggacgtgccccgcctcgcgctcacggcgacggccaccgacgccacccaccgc
gagatcaccgagcggctggacatgccggcggcgcgccacttcgtggccagcttcgaccgg
cccaacatccagtaccggatcgtgccgaagtccgaccccaagaagcagctcctgagcttc
ctgcggcaggagcaccccggggacgccggcatcgtgtactgcctctcgcgcaactcggtc
gagaagaccgccgagttcctctcgcgcaacggggtcgaggcggtgccgtaccacgcgggc
ctggacgcggggacccgcgccgcgcaccagtcgaggttcctgcgcgaggagggcctggtg
gtcgtggcgaccatcgccttcggcatgggcatcgacaagccggacgtgcggttcgtcgcc
cacctggacctgcccaagtcggtcgagggctactaccaggagaccggccgcgcggggcgg
gacggcctgccctccacggcatggatggcgtacggcctcaacgacgtcatacagcagcgc
aagctgatccagtccggcgagggcgacgaggtcttccgccgccgcgcccagtcccacctg
gacgccatgctcgccctgtgcgagaccgcccgctgccgtcgcggccagctcctcgcctac
ttcggacaggagccggacggggccggctgcggcaactgcgacacctgcctgaccccgccc
gagacctgggacggcacggtggcggcgcagaaggtgctgtcgacggtggtgcggctgaag
cgcgagcgcgggcagaagttcggcgccgggcagatcatcgacatcctgctgggcaagcgc
accgccaaggtgatccagttcgaccacgaccagctctccgtgttcggcatcggcgaggag
ctgaccgagggcgagtggcggggcgtcgcccggcagctgctggcccagggcctgctcgcg
gtcgagggggagtacggcacgctcgtgctgaccgaggccagcggcgaggtcctgcggcgg
gagcgggaggtgccgctgcgcaaggagccgaagaagcccgccgcggccaggtcggcgggt
ggcggacgaggggagcgcaaggcgaaggcggccgcggccgagctgcccgcggagctggtc
cccgccttcgaggcgctgcgtgcctggcgtgcggaacaggcccgcgagcagggcgtcccg
gcgtacgtcatcttccacgacgccaccctccgggagatcgccaccgtctggcccacctcg
gtggcgcagctcggcggcatcagcggggtgggtgagaagaagctggcgacgtacggggaa
ggcgtggtcggcgtgctggccgggctggagggaccggactccgccccggcgcccacgccc
gccccggcgcacgagccggccccggcggacggatcgggcaccggctcccgtgcgtacgac
ggtgcggacgactggcccgaccacgagccggaggactggatatag
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