Streptomyces sp. CCM_MD2014: NI25_19820
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Entry
NI25_19820 CDS
T04862
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
strd
Streptomyces sp. CCM_MD2014
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strd03021
]
NI25_19820
Transcription machinery [BR:
strd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NI25_19820
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
Sigma70_ECF
MarR
HTH_31
HTH_24
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AIV35480
UniProt:
A0A0N6ZM09
LinkDB
All DBs
Position
complement(4524134..4525099)
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AA seq
321 aa
AA seq
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MSAEQGSSKVLALAESETAPDSIEALGPVEPVGPIDSVGTIDSVDGDRAGEAVPDLDAVP
AQALPATEAIDTRTLSRSLFLRLAALDEDSPERAYVRDTLIELNLPLVRYAAARFRSRNE
PMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQEL
RLALTKASDELSQKLDRSPTVGELAAVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGG
EGSLADRLGYEDTALEGVEYRESLKPLLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQ
MHVSRLLTRTLSQLREGLISD
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaacagggcagctcgaaggtgctcgcgctcgcggagagcgagaccgcgccc
gactcgatcgaggcgctcggccccgtcgagcccgtcggccccatcgactccgtcggcacg
atcgactccgtcgacggcgaccgggccggtgaagccgtgccggacctcgacgccgtgccg
gcccaggcgcttccggccacggaggccatcgacacccgcaccctgtcccgctccctgttc
ctgcggctcgccgccctcgacgaggacagccccgagcgtgcctacgtccgggacaccctg
atcgagctcaacctcccgctggtgcgctacgccgccgcgcgcttccgctcccgcaacgag
ccgatggaggacatcgtccaggtcggcaccatcggcctgatcaaggcgatcgaccgcttc
gactgcgagcggggggtcgagttcccgacgttcgccatgccgaccgtcgtcggcgagatc
aagcggttcttccgcgacacctcgtggtcggtgcgcgtcccgcgccgcctccaggagctg
cgcctggccctgaccaaggccagcgacgagctgtcccagaagctggaccgctccccgacc
gtgggcgagctggccgccgtcctcggcgtgtccgaggaggacgtcgtcgacggactggcc
gtgggcaacgcctacaccgcctcctcgctggactccccggccccggaggacgacggcggc
gagggctcgctggcggaccgcctgggctacgaggacacggcgctggagggcgtggagtac
cgcgagtccctcaagccgctgctggccaagctgccgccccgggagcggcggatcatcatg
ctgcgcttcttcgccaacatgacccagtcgcagatcggcgaggaggtcggcatctcgcag
atgcacgtctcccggctgctcacccggaccctgtcgcagctgcgcgagggcctcatctcc
gactga
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