Streptomyces sp. CCM_MD2014: NI25_20045
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Entry
NI25_20045 CDS
T04862
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
strd
Streptomyces sp. CCM_MD2014
Pathway
strd03030
DNA replication
strd03430
Mismatch repair
strd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NI25_20045
03430 Mismatch repair
NI25_20045
03440 Homologous recombination
NI25_20045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strd03032
]
NI25_20045
03400 DNA repair and recombination proteins [BR:
strd03400
]
NI25_20045
Enzymes [BR:
strd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NI25_20045
DNA replication proteins [BR:
strd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NI25_20045
DNA repair and recombination proteins [BR:
strd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NI25_20045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
Rad17
AAA_30
AAA_14
zf-CXXC
AAA_5
AAA_18
nSTAND3
AAA_19
AAA_16
AAA_28
TsaE
Motif
Other DBs
NCBI-ProteinID:
AIV35516
LinkDB
All DBs
Position
4561858..4564236
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AA seq
792 aa
AA seq
DB search
MSSLALYRRYRPESFAEVIGQGHVTDPLQQALRNNRVNHAYLFSGPRGCGKTTSARILAR
CLNCEQGPTPTPCGECQSCRDLARNGPGSIDVIEIDAASHGGVDDARDLREKAFFGPASS
RYKIYIIDEAHMVSPQGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRSRTHHYPFRLV
PPGTLRDYLAEVCGREGIAVEEGVLPLVVRAGAGSVRDSMSVMDQLLAGAGADGVTYDMT
TALLGYTDGSLLDSVVEAFVSGDGSAAFGVVDRVIEGGNDPRRFVTDLLERLRDLVILAA
VPDAAEKGLIDAPADVVERMQAQARSFGAAELSRAADIVNEGLTEMRGAHSPRLQLELIC
ARVMLPAAYGDERSVMARLDRIERGVQFSAGAGAPAMGYTPGPEAHAGAGGVAPAGAPLP
PGGGPAAARAAVRGQGAGAPSGGPGGGSSSGAAPSVAPGAGAGAGAGAGAGAGSSADAGG
RSAEGGPAQAAPSSAAGGPAASPAPAAAPAPAPASASGSAPAPGAWPTAAPAGGGRRPGG
WPTAAPAGGGQSRTPAAPSPSAGPSATPAPAAAPAGPAPASPPPGAPGIDPRTIWPNILE
AVKNRRRFTWILLSQNAQVTGFDGTSLQLGFVNAGARDNFVSSGSEDVLRQALAEQFNVQ
WKIDAVVDPSGGSAPPSGVGPSGPSGPSGGYGGGGGFGGGGGFGGGAPAQRPSAPASPSA
PAAPSATPAPAPASAPAAAPAPRPSAPEPPPVSPEDDIPEDDDPDLDESALSGKELLVRE
LGATVVEEIANE
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtctctcgcgctctaccgccgttaccgcccggagtccttcgccgaggtcatcggg
caggggcatgtcaccgacccgctgcagcaggcgctgcggaacaaccgggtcaatcacgcg
tacctgttcagcggtccgcgcggctgtggcaagacgaccagcgcccggatcctggcgcgc
tgtctgaactgcgagcagggcccgacgccgacgccgtgcggcgagtgccagtcctgccgc
gacctcgcgcgcaacgggccgggctccatcgacgtcatcgagatcgacgccgcctcgcac
ggaggtgtggacgacgcccgcgacctgcgggagaaggccttcttcggtcccgcctcgagc
cggtacaagatctacatcatcgacgaggcccacatggtctccccgcagggcttcaacgcc
ctgctgaaggtcgtcgaggagccgccggagcacctcaagttcatcttcgcgaccaccgag
cccgagaaggtcatcgggaccatccggtcgcggacccatcactaccccttccggctcgtg
ccgcccggcaccctgcgcgactacctcgccgaggtgtgcggcagggagggcatcgcggtg
gaggagggtgtgctgccgctcgtggtgcgggccggcgcggggtccgtgcgtgactccatg
tccgtcatggaccagctgctcgcgggcgccggtgccgacggtgtgacgtacgacatgacg
accgccctgctcggctacacggacggttcgctgctcgactcggtcgtcgaggccttcgtc
tcgggggacggctccgccgccttcggggtcgtggaccgggtgatcgagggaggcaacgac
ccgcggcggttcgtcaccgacctgctggagcgcctgcgtgacctggtgatcctcgccgcc
gtgcccgacgccgcggagaaggggctcatcgacgcccccgccgacgtcgtcgagcggatg
caggcccaggcccggtccttcggcgcggccgagctgagccgtgcggccgacatcgtgaac
gaggggctcaccgagatgcgcggcgcccattcgccgcgcctccagctggagctgatctgt
gcccgcgtgatgctgcccgccgcgtacggcgacgagcggtccgtgatggcccgcctggac
cggatcgagcgcggggtgcagttctcggccggtgcgggtgcacccgccatggggtacacg
cccgggcccgaggcgcatgccggtgcggggggcgtggcgcccgccggggctccgctgccg
ccgggcggcggacccgccgcggcccgtgcggcggtacgggggcagggcgccggcgcgcca
agcggtggcccgggcggcggctcgtcctccggtgctgctcccagcgttgctcccggtgcc
ggtgccggtgccggtgccggtgccggtgccggggccgggtcctcggccgacgcgggtggc
cgttccgccgagggcgggcccgcgcaggccgcgccttcttccgccgccggcggtcccgcg
gcttcccccgcgcctgccgccgctcctgctcccgctcccgcttccgcttccggttcggcg
ccggctcccggtgcctggccgaccgcggctcccgccggtggtgggcgccgccccggcgga
tggcccacggcggcccccgcggggggcgggcagtcccggacaccggccgctcccagcccc
tcggccggcccctccgcgactccggccccggctgccgctccggccggtcccgcgcccgcc
tctccgccgccgggcgctcccgggatcgacccccgcacgatctggcccaacatcctggag
gcggtcaagaaccgccgccggttcacctggatcctgctcagccagaacgctcaggtgacc
ggcttcgacggcacctccctccagctcggcttcgtcaacgccggcgcccgggacaacttc
gtcagcagcggcagcgaggacgtgctgcggcaggccctggccgagcagttcaacgtgcag
tggaagatcgacgcggtcgtcgatccctccggcggctcggcgcctccctccggtgtgggc
ccgtccggcccctcgggaccctccggtggctacggcggcggaggcggcttcggcggcggt
ggcggtttcggcgggggcgcgcccgcacagcggccgtcggcgcccgcgtccccgtccgcg
cccgccgccccgtccgcgacccccgctccggctccggcgtccgctccggccgccgccccc
gcgccccggccctcggcacccgagccgcccccggtctcccccgaggacgacatccccgag
gacgacgacccggacctcgacgagtcggcgctctccggcaaggaactgctggtccgcgaa
ctgggcgcgacggtggtcgaggagatcgccaacgagtga
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