Streptomyces sp. CCM_MD2014: NI25_20280
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Entry
NI25_20280 CDS
T04862
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
strd
Streptomyces sp. CCM_MD2014
Pathway
strd03030
DNA replication
strd03430
Mismatch repair
strd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NI25_20280
03430 Mismatch repair
NI25_20280
03440 Homologous recombination
NI25_20280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strd03032
]
NI25_20280
03400 DNA repair and recombination proteins [BR:
strd03400
]
NI25_20280
Enzymes [BR:
strd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NI25_20280
DNA replication proteins [BR:
strd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NI25_20280
DNA repair and recombination proteins [BR:
strd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NI25_20280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AIV35552
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All DBs
Position
4607238..4607942
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AA seq
234 aa
AA seq
DB search
MTGFDLETTSTDPHTARIVTGSAVQYGGGRPTTARTWLSDVGGAEIPADATRIHGYTTEA
ARTAGRPASAVVEEITADLAAAVEEDRPLVIMNATYDLTVLDREARRYGVTPLFDRVSPN
VLDPYVLDKRVRQYRRGGRTLTDLCRHYVVPLEGAHSSEVDATAACELVRKMGRRYRVLS
RLPLDQLHREQVAWAREQNEGLREHFANTPGKEAWARDVSLEWPLLPFRMAVRP
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggttcgacctggagaccaccagcacggacccgcacacggcccggatcgtcacc
ggctccgccgtccagtacggcggcggccggccgaccacggcccggacgtggctctccgac
gtcggcggggcggagatccccgccgacgccacccggattcacggatacacgactgaggcg
gcccgcactgcgggccgcccggcctccgcggtggtcgaggagatcaccgcggacctcgcg
gccgccgtggaggaggaccgcccgctggtcatcatgaacgccacttacgacctcacggtg
ttggaccgggaggcccgccggtacggcgtcaccccgctgttcgaccgggtctctccgaac
gtcctggacccctacgtcctggacaagcgtgtgaggcagtaccggcggggcgggcggacg
ttgacggacctctgccgccactacgtggtgccgctggagggcgcgcactcctctgaggtg
gacgccaccgcggcgtgcgaactggtgcggaagatgggccgccgctaccgggtgctctcc
cggctcccgctggaccagctccaccgggaacaagtggcgtgggcgcgggagcagaacgaa
ggcctccgggagcacttcgcgaacacccccggtaaggaggcgtgggcgcgggacgtgtcc
ctggagtggcccctcctgccgttccggatggcggtgaggccgtga
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