Streptomyces sp. CCM_MD2014: NI25_24010
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Entry
NI25_24010 CDS
T04862
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
strd
Streptomyces sp. CCM_MD2014
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strd03032
]
NI25_24010
03036 Chromosome and associated proteins [BR:
strd03036
]
NI25_24010
03400 DNA repair and recombination proteins [BR:
strd03400
]
NI25_24010
DNA replication proteins [BR:
strd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NI25_24010
Chromosome and associated proteins [BR:
strd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NI25_24010
DNA repair and recombination proteins [BR:
strd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NI25_24010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Urease_beta
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
AIV36162
UniProt:
A0A0N6ZMH5
LinkDB
All DBs
Position
5405212..5405493
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AA seq
93 aa
AA seq
DB search
MNRSELVAALADRAEVTRKDADAVLAAFAEVVGDIVSKGDEKVTIPGFLTFERTHRAART
ARNPQTGDPIQIPAGYSVKVSAGSKLKEAAKGK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcagtgagctggtggccgcgctggccgaccgcgccgaggtgacccgcaaggac
gccgacgccgtgctggccgcgttcgccgaggttgtcggcgacatcgtctccaagggcgac
gagaaggtcaccatccccggcttcctgaccttcgagcgcacccaccgtgccgctcgcacc
gcccgcaacccgcagaccggcgacccgatccagatccccgccgggtacagcgtcaaggtt
tcggcgggctccaagctcaaggaagccgccaagggcaagtaa
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