Streptomyces sp. CCM_MD2014: NI25_26485
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Entry
NI25_26485 CDS
T04862
Name
(GenBank) DNA recombination protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
strd
Streptomyces sp. CCM_MD2014
Pathway
strd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NI25_26485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strd03400
]
NI25_26485
DNA repair and recombination proteins [BR:
strd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NI25_26485
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NI25_26485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
Motif
Other DBs
NCBI-ProteinID:
AIV38909
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Position
5951821..5952567
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AA seq
248 aa
AA seq
DB search
MSLFRDDGIVLRTQKLGEADRIITMLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQ
FFSKGSELVGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQ
YLLLVGGLRTLARGEHTPNLVLDAFLLRSLAVNGYAPTFGDCAKCGLPGPNRFFSVGSGG
SVCVDCRVPGSVVPSPQALELLGALLAGDWDTADAAEPRYVREGSGLVSAYLHWHLERGL
RSLRYVEK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttccgcgacgacggcatcgtgctgcgcacccagaagctgggtgaggcggac
cggatcatcaccatgctcacgcgcggtcacggccgcgtacgcgccgtggcgcgcggggtg
cggcgcacgaagtcgaagttcggcgcgcggctggagccgttctcgcacgtggacgtgcag
ttcttctcgaagggcagcgagctggtcgggcgcgggctgcccctgtgcacgcagagcgag
acgatcgcgccctacggcggcgggatcgtcaccgactacgcgcgctacaccgcggggacc
gccatgctggagacggccgagcggttcaccgaccacgagggcgagccggcggtgcagcag
tatctgctgctggtcggcggactcaggaccctcgcccggggcgagcacacgccgaacctg
gtgctggacgcgttcctgctgcgctcgctggccgtgaacgggtacgccccgaccttcggg
gactgcgcgaagtgcggcctgcccggtccgaaccggttcttctcggtcggctcgggcggc
tccgtctgcgtcgactgccgggtgcccggcagcgtcgtaccctcgccgcaggccctggaa
ctgctcggggcgctgctcgcgggggactgggacactgcggacgcggccgagccgcggtac
gtgcgggaggggagcggactggtctccgcctacctgcactggcaccttgagcggggactg
cgctccctgcggtacgtcgagaagtag
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integrated database retrieval system
