Streptomyces sp. CCM_MD2014: NI25_27875
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Entry
NI25_27875 CDS
T04862
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
strd
Streptomyces sp. CCM_MD2014
Pathway
strd03420
Nucleotide excision repair
strd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NI25_27875
03430 Mismatch repair
NI25_27875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strd03400
]
NI25_27875
Enzymes [BR:
strd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NI25_27875
DNA repair and recombination proteins [BR:
strd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NI25_27875
MMR (mismatch excision repair)
Other MMR factors
NI25_27875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
AIV38926
UniProt:
A0A0N6ZV54
LinkDB
All DBs
Position
6299084..6301549
Genome browser
AA seq
821 aa
AA seq
DB search
MNDELLDPAQIAAEDPVLGDALERLRAQMEQDNFIDFSLMQRLVVEALEGKEPGAVQALA
PLQHVLVDEYQDVNVVQERLIELMHRESDTLFVVGDDDQAIYGWRGADITNILEFDQRYP
NAAVHKLLTNFRSTSAIVEAASTFAGQELGATRLQKQLTAAVDRDPREFGVLRFPTRMDE
AAFVGDRIKELLGTRYEEADGTVRGLTPADFAILMRSTNMSEGDETKRHTAFIRALETRG
IEYALNAGGQLFERAQPAAVLSAFQLLRGENPNRTQVDGLFNSELSVAFPCADLGRVRHV
FADWGRRIHAPVAPGVPRQRLFPQQLLHDLLEALGVAASGFGDGVMADLGTFSKILTDFE
SVYVSVDGKARYGELLNFLQNVAGEGYETDNQMMARPDAVTVSTIHKAKGLEFPVVFVVD
VEAGRFPGRKRSYDGWIPAPLVQRALNNGSYQTDRPDQARLFYTAITRAERFLYVTGSEW
LPGGAKPTKVSPYAAMLTHPEVRRDLLDPSAPPKVMPPPAVPSRRGDESVLPTTYSQIHT
YMRCPHAYKLSVVHGFAPPIPELFGFGRAVHAAVGKVHQLYKDQAPSPVEARNVAEDLFH
LKHVAPSQDPVNRPGAYERAKQSSANIVASYVDKYAKDFESKRQVELPFEVPVNRAVISG
AIDLLLSYDDSDQIRDASVIDFKTMEGGPEPINNPDLHWENLSLQVQLYARGAVQVYGMN
ARTGAVHLLKDGQRVSVPVDTDAVDAAVANVDWAVDRIMEGDFPQRASGKKCGGCDFAQI
CPKKVQQFATSQEPPKLHLPASNGGKEFLMVSAFSQLGPDQ
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgaactactcgatcctgcacagatcgctgccgaagatccagtgctgggcgac
gctctggagcgtcttcgcgcgcagatggagcaggacaacttcatcgacttctcactgatg
cagcgcctcgtggtcgaggcgcttgagggcaaggaacccggggcagtgcaggcacttgct
cctctccagcacgtgctggtggatgagtaccaggacgtgaacgtcgtacaggagcgtctg
atcgagctgatgcaccgcgagtccgacaccctcttcgtggtgggcgacgacgatcaggcg
atctacggatggcgcggcgcggacatcacgaacattttggaattcgaccagcgttatccg
aacgcggccgtgcacaagctgctcaccaacttccggtccacttcggccatcgtcgaggcc
gccagcacgttcgccgggcaggagttgggcgccacgcggctgcagaaacaactgaccgcc
gctgtggaccgtgacccccgtgagttcggcgtcctgcggttccccacgcggatggacgag
gctgctttcgtcggcgaccggatcaaggaactgctcggcacccgctacgaggaagcggac
gggaccgtgcgcggtctgactcccgccgacttcgccatcctgatgcggtcgacgaacatg
tccgaaggcgatgaaaccaagcgccacaccgcgttcatccgagccctggaaacgcggggc
atcgagtacgccctcaatgccggcggccagctcttcgaacgagcccagcccgcagccgtg
ctcagcgcttttcagctgctgcgcggcgaaaacccgaaccgtacgcaagtggacggactg
ttcaactccgagctgagcgtagccttcccctgtgccgacctgggccgtgtcaggcacgtc
ttcgccgattggggtcgccgcatccacgctcccgtcgcaccaggcgttccacgtcagcgc
ctcttcccgcagcagctgctccatgacctgttggaagccctcggcgtcgccgccagcggg
ttcggcgacggcgtcatggccgacctgggtaccttcagcaagatccttacggacttcgag
tcggtgtacgtctcggtcgacggcaaggcacggtacggggagcttctgaacttcctgcag
aacgtggcaggcgagggatatgagaccgacaaccagatgatggcccgccctgatgcagtg
acggtctccacgatccacaaggcaaaggggctggagttcccggtcgtcttcgtggtggac
gtcgaagccggccgtttcccaggcaggaagcgctcgtacgacgggtggatccctgccccg
ttggtgcagcgggccctgaacaacggcagttaccagacggatcggccggaccaggcccgg
ctgttctacacggccatcacccgcgccgagcgctttctgtacgtcaccggatccgaatgg
ctacccggaggtgcaaagccgaccaaggtgtccccctacgcagccatgctgacgcatccc
gaagtccgtcgcgaccttctcgacccgtccgccccgcccaaggtgatgcccccgcccgcc
gttccgtccaggcgtggcgacgagtccgtgctgcccaccacgtactcccagatccacacc
tacatgcgttgcccccacgcctacaagctcagcgtggtgcacgggttcgccccgccgatc
ccggagctcttcgggttcggacgcgcggtccacgcggcagtgggcaaggtgcaccagctc
tataaagaccaagcacccagcccggtcgaggcgcggaacgtggccgaggacctctttcac
ctcaagcacgtcgccccgagccaggacccggtcaaccggccaggcgcgtacgagcgtgcg
aagcagagctccgcgaacatcgtggccagctacgtcgataagtacgcgaaggacttcgag
agcaagcggcaggtcgagcttcctttcgaggtcccggtgaaccgcgcggtcatttccgga
gccatcgatctgctgctcagctacgacgactcggaccagatccgcgacgcatcggtgatc
gacttcaagaccatggaagggggccccgaaccgatcaacaatcccgatctccactgggag
aacctctccctgcaggtccagctctacgcacgtggcgccgtacaggtgtacgggatgaac
gcgcggactggtgccgtacacctcctcaaggatggccagcgggtgtcggttccggtcgac
accgacgccgtcgacgccgcggtcgccaatgtggactgggcggtcgaccgaatcatggaa
ggcgacttcccgcagcgcgcctcgggaaagaagtgcggtggctgcgacttcgcccagatc
tgcccgaagaaggtgcagcagttcgcgacgtcacaggagcctccgaagcttcaccttccg
gctagtaacggcggcaaggagttcctgatggtgtccgccttctctcagctcgggcccgac
cagtag
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integrated database retrieval system
