Streptomyces sp. CCM_MD2014: NI25_29180
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Entry
NI25_29180 CDS
T04862
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
strd
Streptomyces sp. CCM_MD2014
Pathway
strd03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
NI25_29180 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
strd03011
]
NI25_29180 (rpsA)
Ribosome [BR:
strd03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
NI25_29180 (rpsA)
Bacteria
NI25_29180 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
SOGA1-2-like_CC
TraH_2
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AIV37052
LinkDB
All DBs
Position
6599908..6601416
Genome browser
AA seq
502 aa
AA seq
DB search
MTSSTETTATTPQVAVNDIGNEEAFLAAIDETIKYFNDGDIVDGVIVKVDRDEVLLDIGY
KTEGVIPSRELSIKHDVDPNEVVAVGDEIEALVLQKEDKEGRLILSKKRAQYERAWGTIE
KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD
KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV
SELSWKHIDHPSEVVEVGQEVTVEVLDVDMDRERVSLSLKATQEDPWQQFARTHQIGQVV
PGKVTKLVPFGAFVRVDEGIEGLVHISELAERHVEIPEQVVQVNDEIFVKVIDIDLERRR
ISLSLKQANEAFGADPSAVEFDPTLYGMAASYDDQGNYIYPEGFDPETNDWLEGYETQRE
AWETQYAEAQQRFEQHQAQVIKSREADEKAAAEGVDTAGAAQAASGSGGGGSYSSEGGDN
SGALASDEALAALREKLAGGQS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcagcaccgagaccaccgccaccaccccgcaggttgcggtcaacgacatcggt
aacgaggaagccttcctcgccgcgatcgacgagacgatcaagtacttcaacgacggcgac
atcgtcgacggcgtcatcgtgaaggtcgaccgggacgaggtcctgctcgacatcggttac
aagaccgaaggtgtcatcccgagccgcgagctctcgatcaagcacgacgtcgaccccaac
gaggtcgtcgccgtcggtgacgagatcgaggccctggtcctccagaaggaggacaaggaa
ggccgcctgatcctctcgaagaagcgcgcccagtacgagcgtgcctggggcaccatcgag
aagatcaaggaagaggacggcatcgtcaccggtaccgtcatcgaggtcgtcaagggtggt
ctcatcctcgacatcggcctccgcggcttcctcccggcctccctggtcgagatgcgccgt
gtccgcgacctccagccctacgtgggcaaggagctcgaggcgaagatcatcgagctggac
aagaaccgcaacaacgtggtcctgtcccgccgtgcctggctggagcagacccagtccgag
gtccgccagacgttcctcaccaccctccagaagggtcaggtccgttccggcgtcgtctcc
tcgatcgtcaacttcggtgccttcgtggacctgggtggcgtcgacggtctggtccacgtc
tccgagctgtcctggaagcacatcgaccacccgtccgaggtcgtcgaggtcggccaggag
gtcaccgtcgaggtcctcgacgtcgacatggaccgcgagcgtgtctccctgtcgctgaag
gcgacccaggaagacccgtggcagcagttcgcccgcacccaccagatcggccaggtcgtg
cccggcaaggtcacgaagctggtgccgttcggtgcgttcgtccgcgtggacgagggcatc
gagggtctggtccacatctccgagctggccgagcgccacgtggagatcccggagcaggtc
gtccaggtcaacgacgagatcttcgtcaaggtcatcgacatcgacctcgagcgccgccgc
atcagcctctcgctgaagcaggccaacgaggccttcggtgccgacccgtccgcggtcgag
ttcgacccgaccctgtacggcatggccgcgtcctacgacgaccagggcaactacatctac
cccgagggcttcgaccccgagaccaacgactggctcgagggctacgagacccagcgcgag
gcctgggagacgcagtacgccgaggcccagcagcgcttcgagcagcaccaggcgcaggtc
atcaagtcccgcgaggcggacgagaaggccgctgccgagggtgtcgacaccgcgggtgcg
gcccaggccgcgtccggcagcggtggcggcggctcgtactcctccgagggcggcgacaac
tccggcgccctcgcgtcggacgaggcgctggccgcgctgcgcgagaagctggccggcggc
cagagctga
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