Streptomyces sp. CCM_MD2014: NI25_32690
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Entry
NI25_32690 CDS
T04862
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
strd
Streptomyces sp. CCM_MD2014
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strd03400
]
NI25_32690
DNA repair and recombination proteins [BR:
strd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NI25_32690
Archaeal homologous recombinant proteins
NI25_32690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
AIV37689
UniProt:
A0A0N6ZRR0
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Position
7353709..7354872
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AA seq
387 aa
AA seq
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MRLLHTSDWHLGRAFHRVNMLGAQAGFIGHLVDTVREHAVDAVVVSGDVYDRAVPPLAAV
ELFDDALHRLAGLGVPTMMISGNHDSARRLGVGAGLIDRAGIHLRTDPAGCGTPVVLTDA
HGDVAFYGLPYLEPALVKAEFGVEKAGHEAVLGAAMDRVRADLATRARGTRSVVLAHAFV
TGGEQSDSERDITVGGVAAVPSGVFDGVDYVALGHLHGCQTLTERVRYSGSPLPYSFSEH
RHRKSMWLVDLDATGAVSAERVDCPVPRALARLRGTLADLLADPELTPHEDAWVEATLTD
PVRPDEPMARLTERFPHTLSLVFDPERAPEAPGVSYARRLADRSDQEIAEDFVAHVRGAG
PDSHEQGVLRDAFDAVRADDTVREVAR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagattgctgcacacgtccgactggcacctgggccgggcgttccaccgggtgaacatg
ctcggggcgcaggccgggttcatcggccacctcgtcgataccgtgcgcgagcacgccgtc
gacgccgtggtggtgtcgggagacgtgtacgaccgggcggtgccgccgctcgccgccgtc
gagctgttcgacgacgccctgcaccgcctcgccggcctcggtgtgccgacgatgatgatt
tccggcaaccacgactcggcccgccgtctcggcgtcggcgccgggctcatcgaccgggcc
ggcatccacctgcgcaccgatccggcgggctgcggcaccccggtggtgctgaccgacgcc
cacggggacgtcgccttctacgggctgccgtatctcgaaccggctctggtcaaggccgag
ttcggcgtggagaaggcggggcacgaggccgtgctcggcgccgccatggaccgggtgcgc
gccgacctcgccacgcgtgcacgcggcacccgttccgtcgtcctcgcgcacgccttcgtc
accggaggcgagcagagcgacagcgagcgggacatcaccgtcggcggggtcgccgccgtg
ccctccggtgtcttcgacggcgtcgactacgtggcgctcgggcacctgcacggctgccag
accctcaccgagcgcgtccgctactccggctccccgctgccgtactccttctccgagcac
cggcaccgcaagagcatgtggctcgtcgatctggacgcgacgggagcggtgagcgccgag
cgggtcgactgcccggtcccgagggccctggcccggctgcgcggcacgctggcggacctg
ctcgccgacccggagctgaccccgcacgaggacgcgtgggtcgaggcgaccctcaccgac
ccggtccggccggacgagcccatggcccggctcaccgagcggttcccgcacacgctcagc
ctcgtcttcgatccggagcgcgcccccgaggcgccgggcgtgtcctacgcccggcgcctc
gccgaccgcagcgaccaggagatcgcggaggacttcgtggcgcatgtgcgcggcgccggg
cccgactcccacgaacagggcgtactgcgggacgccttcgacgcggtgcgcgcggacgac
accgtgcgggaggtggcccggtga
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