Streptomyces sp. CCM_MD2014: NI25_34725
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Entry
NI25_34725 CDS
T04862
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
strd
Streptomyces sp. CCM_MD2014
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strd03021
]
NI25_34725
Transcription machinery [BR:
strd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NI25_34725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
HTH_Crp_2
MarR
HTH_38
HTH_27
MarR_2
Sigma70_ECF
GerE
IF2_N
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AIV38047
UniProt:
A0A0N6ZSL6
LinkDB
All DBs
Position
complement(7797439..7798326)
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AA seq
295 aa
AA seq
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METAVVRPEAQAVEKTAGSWTGEGTPRGVVDPRAVAPRDARQLSRQFFRRLTELEEGTHE
YQYARNTLIEMNMSLVRFAAGRFRGRGDDMEDIVQTGMIGLIKAIDRFELSREVEFTSFA
LPYIVGEIKRFFRDTTWAVHVPRRLQELRVELARAREELSSRLDREPTVAELATLMNISE
NEVIEGQIASNGYNSSSLDAALTGDGPENGESVLADFIGVEEDGLRLVEDFHSLAPLMAE
LSERDRQIIHLRFVEEATQAEIGERLGCSQMHVSRLIKRIITRLREGMLGELGCA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgccgtggtccggccggaagcgcaggccgtcgagaagaccgccgggagctgg
acgggtgagggaacaccgcggggcgtcgtggacccccgcgccgtggccccgcgtgacgca
cggcagctgtcccgccagttcttccggcgcctgacggaactcgaagagggcacgcacgaa
taccagtacgcgcgcaacacgctcatcgagatgaacatgtcgctcgtgcggttcgccgcg
ggccgcttccgcggtcgcggggacgacatggaggacatcgtccagaccgggatgatcggc
ctgatcaaggcgatcgaccgcttcgagctgtcgcgcgaggtcgagttcacgtccttcgcg
ctgccgtacatcgtcggcgagatcaagcgcttcttccgtgacacgacctgggccgtgcac
gtgccgcggcgtcttcaggagctgcgcgtggagctggccagggcccgcgaggagctttcc
tcccgcctggaccgcgagcccaccgtggccgaactcgccacgctgatgaacatcagcgag
aacgaggtgatcgagggccagatcgcgtccaacggctacaactcctcctcgctggacgcc
gcgctgaccggtgacggccccgagaacggcgagtcggtcctggccgacttcatcggcgtg
gaggaggacgggctgcgactcgtggaggacttccactcgctggccccgctgatggcggag
ctgagcgagcgcgaccggcagatcatccacctgcggttcgtggaggaggccacgcaggcg
gagatcggcgaacggctcggctgctcgcagatgcacgtgtcccggctgatcaagcggatc
atcacccggctgcgcgaaggaatgctgggcgagctcggctgcgcctga
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