Streptomyces sp. 769: GZL_01872
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Entry
GZL_01872 CDS
T03587
Name
(GenBank) DNA-directed RNA polymerase C alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
stre
Streptomyces sp. 769
Pathway
stre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GZL_01872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stre03021
]
GZL_01872
03400 DNA repair and recombination proteins [BR:
stre03400
]
GZL_01872
Enzymes [BR:
stre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GZL_01872
Transcription machinery [BR:
stre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GZL_01872
DNA repair and recombination proteins [BR:
stre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GZL_01872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AJC54466
UniProt:
A0A0A8EKE3
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All DBs
Position
complement(1968234..1969235)
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AA seq
333 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLVLNIKQLVVSSEHDEPVVTYLRKQGPGLVTAADIVSPAGVEVHN
PDLVLATLNGKGKLEVELTVERGRGYVSAVQNKQAGQEIGRIPVDSVYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPHDAVASAGKTLVELFGLARELNTEAEGIDMGSSPTD
VALAADLALPIEGLELTVRSYNCLKREGVHSVGELVARSEADLMDIRNFGAKSIDEVKAK
LAGMDLALRDSPPGFDPTAAAFGADAGFVETEQ
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtgctgattgctcagcgtccgtcactgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctccgccgc
actctcctgtcgtcgatccccggcgctgccgtcaccagcatccgcatcgacggcgtcctg
cacgagttcaccaccgttccgggcgtcaaggaggacgtcaccgacctggtcctcaacatc
aagcaactggtcgtctcctcggagcacgacgagccggtcgtgacgtacctgcgcaagcag
ggcccgggtctggtcaccgccgccgacatcgtgtccccggccggtgtcgaggtgcacaac
cccgacctcgtcctcgccacgctcaacggcaagggcaagctggaggtggagctgacggtc
gagcgcggtcgcggctacgtctccgccgtgcagaacaagcaggccggccaggagatcggc
cggatcccggtcgactccgtctactcgccggtcctcaaggtcacctacaaggtcgaggcc
acgcgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gcgatgcgtccgcacgacgccgtggcctcggccggcaagacgctggtcgaactcttcggt
ctcgcccgcgagttgaacaccgaagccgagggcatcgacatgggctcgtccccgacggac
gtcgctctggctgccgacctggcgctgccgatcgaggggctggagctcaccgttcggtcg
tacaactgcctcaagcgtgagggcgtccactccgtgggtgagctcgtggcgcgctccgag
gcggacctgatggacatccgcaacttcggtgcaaagtcgatcgacgaggtcaaggcgaag
ctggccggcatggacctggctctcagggacagtccgcccgggttcgacccgaccgccgct
gccttcggtgcggatgcaggtttcgtggagaccgagcagtag
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