KEGG   Streptomyces sp. 769: GZL_02998
Entry
GZL_02998         CDS       T03587                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
stre  Streptomyces sp. 769
Brite
KEGG Orthology (KO) [BR:stre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stre03400]
    GZL_02998
Enzymes [BR:stre01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GZL_02998
    5.6.2.6  RNA 3'-5' helicase
     GZL_02998
DNA repair and recombination proteins [BR:stre03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GZL_02998
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_4th_Lhr DEAD WHD_3rd_Lhr Helicase_C ResIII AbiEi_4 DUF6406 AAA_25 PhoH
Other DBs
NCBI-ProteinID: AJC55585
LinkDB
Position
3187679..3192538
AA seq 1619 aa
MSAPWTPRGDGAAAGRGRRRTGLSVVRCTMGNMTEAALDSFSPATRGWFAGAFSAPTAAQ
EGAWRAIAEGSDVLVVAPTGSGKTLAAFLASLDALASAPPPAEPKKRCRVLYVSPLKALA
VDVERNLRSPLTGIRQEAIRLGLPEPDIRVGIRSGDTPAAERRALATRPPDILITTPESL
FLMLTSAAREALAGVETVILDEVHAVAGTKRGAHLALSLERLDELLDRPARRIGLSATVR
PVEEVARYLSPRRRVEIVQPPSGKRFDLSVVVPVEDMGELGSAPVQEGETGEKPSIWPQV
EERIADLVQAHRSTIVFANSRRLAERLCNRLNEIAYERTMGTALPEHHSPAELMAESGAA
KGAPPLLARAHHGSVSKEQRALVEEDLKAGRLPAVVATSSLELGIDMGAVDLVVQVESPP
SVASGLQRVGRAGHQVGAVSKGIVFPKYRGDLVQAAVVTERMRSGAIEALRVPANPLDVL
AQQLVAMAAMDTWDVEELLAVVRRAAPFAALPESAFTSVLDMLAGRYPSDAFAELRPRLV
WDRVAQTVTGRPGAQRLAVTSGGTIPDRGLFGVFLAGDSSAKGGGRRVGELDEEMVYESR
VGDVFTLGTTSWRIEDITRDRVLVTPAPGVPGRLPFWKGDQLGRPLELGRALGAFLREIG
SLSPEEAAARLSAAGLDDRAVANVLAYLSEQRQSCGHVPDDRTIVVERFRDELGDWRIVI
HSPFGAQVHAPWALALGARLAERYGLDAQVMHADDGIVLRLPDADLMGLDLLDGDGGFGA
AGRAEYDPEQSPVGAADVVFEHGEVDQLVTDQVGGSALFASRFRECAARALLLPRRSPGK
RTPLWQQRQRAAQLLQVASEFGSFPIVLEAVRECLQDVFDVPGLTELMADIEARRVRLVE
VTTPDPSPFARSLLFGYVAQFLYEGDSPLAERRAAALSLDSRLLAELLGRAELRELLDAQ
VLAELEAELQWRTEDRRVKDVEGVADALRVLGPLTDAELTERGAEPAWAEELARARRAIR
VRIAGAEHWAAVEDAGRLRDALGTALPVGVPESFTEPVKDPLGDLLSRYARTHGPFTSEQ
AATRFGLGTAVTDGALHRLAATGRLVQGEFHPEGIGQEWCDAQVLRRLRRRSLAALREEL
EPVPPAALAAFLPQWQHVGVPRPAPASGAPAPPVAAATSGYGLRGIDGLVRAIEQLQGAP
VPASALEKLILPSRVGGYTPALLDELTATGEVLWAGAGALPGKDGWLSLHLADTAPLLLQ
PPLPLEPTALHESVLTALAPGYGLFFRQIADQVRATTHPDATDPQLADALWELAWSGRLT
NDTLAPLRALLGSGRTAGSTAHRTRRTVPRGRWGHLRAEFGGGPLNAAARPTASRSGPPT
VGGRWSLLPAPEPDPTRRAHALARTLLDRHGIVTRGAVAAEGVAGGFSAAYRVLSVFEES
GQARRGYVVEGLGAAQFAMDGAVDRLRAISNQRERGADAPFPDGGPGQPRRALVLAAADP
ANAYGAALSWPEPPEGATHKPGRKAGSLVVLVDGELALYMERGGKTLLIWPLGTDPAEAA
ADPRLRPAVEALVEAARAGAVGTLTTERINGTAALTSPFAPVLEAAGFHPTPRGLRLRG
NT seq 4860 nt   +upstreamnt  +downstreamnt
gtgtccgcaccgtggacgccgcgcggcgacggcgccgcggcgggccgcggccggcggcgg
accggattgtcagtggtccggtgcacgatggggaacatgaccgaggcagcgctcgattcg
ttctcgcccgcgacccgcggctggttcgccggggcgttcagcgcgcccaccgccgcgcag
gagggcgcctggcgggcgatcgccgagggatccgacgtcctggtggtggcgccgacgggc
tccggcaagacgctggccgcgttcctggcgtcgctggacgcactggcgagcgccccgccg
cccgccgagccgaagaagcgctgccgggtgctgtacgtctcgcccctgaaggccctcgcc
gtcgatgtggagcggaatctgcgcagtccgctgacggggatccggcaggaggcgatccgc
ctcgggctgccggagccggacatccgggtcggcatccgctccggcgacaccccggccgcc
gagcgccgagcgctggccacccgcccgccggacatcctgatcacgacgcccgaatcgctg
ttcctgatgctgacgtccgcggcccgggaggcgctggccggcgtcgagacggtcatcctg
gacgaggtgcacgcggtcgccggcaccaagcgcggtgcccatctggcgctgtccctggag
cggctggacgagctgctggaccgcccggcgcgccggatcgggctgtccgcgacggtccgc
ccggtggaggaggtggcccgctatctgtcgccgcggcgccgggtggagatcgtccagccg
ccgtccggcaagcggttcgacctctcggtggtcgtcccggtggaggacatgggagagctc
ggcagcgcccccgtccaggagggcgagacgggcgagaagccgtccatctggccgcaggtc
gaggagcggatcgccgacctcgtccaggcccaccgctccacgatcgtcttcgccaactcc
cgccgcctcgcggagcggctgtgcaaccgcctcaacgagatcgcctacgagcgcaccatg
ggcacggccctgcccgagcaccacagccccgccgagctgatggccgagtccggtgccgcc
aagggcgcgccgccactgctggcccgcgcccaccacggctcggtctccaaggagcagcgc
gccctggtggaggaggacctcaaggcgggccggctgcccgcggtggtcgccacgtccagc
ctggagctgggcatcgacatgggtgcggtcgacttggtcgtccaggtggagtcgccgccg
tcggtggcctccggactccagcgggtgggccgggccggccaccaggtcggcgcggtgtcc
aagggcatcgtcttccccaagtaccgcggcgatctggtgcaggcggcggtggtcaccgag
cggatgcgctcgggcgccatcgaggcgctgcgggtgcccgccaatccgctggacgtgctg
gcccaacagctggtcgcgatggcggcgatggacacctgggacgtcgaggagctgctggcc
gtggtccgcagggcggccccgttcgccgcgctcccggagtccgcgttcacctcggtgctg
gacatgctcgccgggcgctatccgtccgacgccttcgccgagttgcgcccccggctggtc
tgggaccgcgtcgcacagaccgtcaccggccgccccggtgcccagcgactggccgtgacg
tccggcggcacgatccccgaccgcggcctgttcggcgtcttcctcgccggcgacagctcc
gccaagggcggtgggagacgggtgggcgagctcgacgaggagatggtctacgaatcccgg
gtgggcgacgtcttcaccctcggcaccacctcctggcgcatcgaggacatcacccgcgac
cgggtgctggtcacgcccgcccccggggtgcccggccgactgccgttctggaagggcgac
caactcggccgcccgctcgaactgggccgtgcgctgggcgcgttcctccgggagatcggc
tcgctctcccccgaggaggcggccgcccggctgtccgccgccgggctcgacgaccgggcg
gtcgccaacgtcctggcctatctctccgaacagcgccagtcctgcggccatgtcccggac
gaccgcaccatcgtcgtcgagcgcttccgcgacgagctgggcgactggcggatcgtcatc
cactcccccttcggggcgcaggtgcacgccccctgggccctggccctgggcgcccgactc
gccgagcgctacggcctggacgcccaggtgatgcacgccgacgacggcatcgtgctgcgg
ctgccggacgccgacctgatgggcctggacctcctcgacggcgacggcggcttcggcgcc
gcaggccgcgcggagtacgaccccgagcagtccccggtgggcgccgccgatgtggtattc
gagcacggcgaggtcgatcagctcgtcaccgaccaggtcggcggctccgcgctgttcgcc
tcccggttccgggagtgcgcggcgcgcgccctgctgctgccccgccgcagccccggcaag
cgcaccccgctgtggcagcagcgccagcgcgccgcccaactcctccaggtcgcgagcgag
ttcggctcgttcccgatcgtgctggaggcggtccgcgaatgcctccaggacgtcttcgac
gtcccgggtctgacggagctgatggccgacatcgaggcccgccgggtccgcctggtggag
gtcacgacgccggacccgtccccgttcgcccgctcgctgctgttcggctacgtcgcccag
ttcctctacgagggcgactccccgctggccgagcgccgggccgccgcgctctccctggac
tcccggctgctggccgaactcctgggccgggccgagctgcgcgagctgctggacgcgcag
gtgctggccgagctggaggccgagctgcaatggcgcaccgaggaccgccgcgtcaaggac
gtcgagggcgtcgccgacgcgctgcgggtgctcgggccgctgaccgacgccgagttgacc
gagcgcggcgcggagccggcctgggccgaggagctggcccgggcccggcgcgccatccgg
gtgcggatcgccggcgccgagcactgggccgccgtcgaggacgccggccggctccgggac
gccctgggcaccgcgctgccggtcggcgtccccgagtcgttcaccgagccggtcaaggac
ccgctgggcgatctgctgtcccgttatgcccgcacccacggcccgttcacgtccgagcag
gcggccacccgcttcggcctcggcaccgccgtcaccgacggcgccctgcaccgcctggcc
gccaccggccgcctggtccagggcgagttccatcccgagggcatcggccaggagtggtgc
gacgcccaggtgctgcgccggctccggcgccgctcgctggccgcgctgcgcgaggagctg
gagccggtgccgcccgccgcgctggccgccttcctcccccagtggcagcacgtcggcgtc
ccgcgcccggcacccgcctccggggcacccgcaccaccggtcgccgccgccacctccggg
tacgggctgcgcggcatcgacggcctggtccgggcgatcgagcagctccagggcgcgccg
gtgccggcctccgcactggagaagctgatcctgccgtcccgggtcggcggctacaccccc
gccctgctggacgagctcaccgccaccggcgaggtgctgtgggccggcgccggcgccctg
cccggcaaggacggctggctctccctccacctcgccgacaccgcgcccctgctcctccag
cccccactgcccctggagccgaccgcactgcacgagtccgtgctgaccgccctcgccccc
ggttacggcctgttcttccggcagatcgccgaccaggtccgcgccaccacgcatccggac
gccaccgatccgcagctcgccgacgcgctgtgggagctggcctggtccggccggctcacc
aacgacaccctggcgccgctgcgcgccctgctcggctcgggccgcacggccggctccacg
gcccaccgcacccggcgcaccgtcccccgcggcaggtgggggcacctccgagcggagttc
gggggagggccgctgaacgccgccgcgcgccccaccgcctcccgctccggcccgccgacg
gtcggcggccgctggtcgttgctgcccgcccccgagccggatccgacccgccgcgcccac
gccctggcccgtacgctcctggaccggcacggcatcgtcacccgcggcgcggtcgccgcc
gaaggggtcgccggcggcttctccgccgcctatcgcgtgctgtccgtcttcgaggagtcc
gggcaggcccgccgcggctatgtcgtcgaggggctgggcgccgcccagttcgcgatggac
ggcgcggtggaccggctgcgggcgatcagcaaccaacgggagcgcggcgccgacgccccc
ttccccgacggcggcccggggcagccccgccgcgccctggtcctcgccgccgccgaccct
gccaacgcgtacggcgccgccctgtcctggcccgagccccccgagggcgcgacccacaaa
ccgggccgcaaggccggttcgctggtcgtcctggtcgacggcgagctggcgctctacatg
gagcgcggcggcaagaccctgctgatatggccactgggcaccgacccggccgaggccgcc
gccgacccccggctccggccggccgtcgaggctctcgtcgaggcggcccgggccggcgcc
gtcggcaccctgaccaccgagcgcatcaacggcaccgccgccctcacctccccgttcgcg
cccgtcctggaggccgcgggcttccacccgacgccgcgggggctgcggctgcgcggctga

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