Streptomyces sp. 769: GZL_03389
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Entry
GZL_03389 CDS
T03587
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
stre
Streptomyces sp. 769
Pathway
stre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GZL_03389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stre03021
]
GZL_03389
03019 Messenger RNA biogenesis [BR:
stre03019
]
GZL_03389
Transcription machinery [BR:
stre03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GZL_03389
Messenger RNA biogenesis [BR:
stre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GZL_03389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
VAD1-2
AAA
NACHT
AAA_22
ResIII
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AJC55975
LinkDB
All DBs
Position
complement(3631658..3633706)
Genome browser
AA seq
682 aa
AA seq
DB search
MSDTTDLMGARTDGSATTPATDAPAAPATTRRRRSGTGLEGMVLAELQQIASGLGIKGTA
RMRKSQLIEVIKEKQAAGSGAAAKADAPADTETKPKRRTTSKARTGEDGAEPAAKAAKST
KAADKSGTQAQIDIPGQPSPKVSTALDQGGAPTDEAPAGERRRRRATAPAGSPDADVRTE
AKVEAATAVKTEVRTDTAVAPQEAGEGRSVKGAERQDRGDRQDRGQKGERGRRDRDRDRD
RDRRKTDAGDSGQGGNRQRDRRDGGDDEDFEGGRRGRRGRYRDRRGRRGREDFAGEPQVA
EDDVLIPVAGILDILDNYAFIRTSGYLPGPNDVYVSLAQVRKNGLRKGDHVTGAVRQPKD
GERREKFNALVRLDSVNSMAPEQGRQRPEFGKLTPLYPQERLRLEGESGGLTTRIIDLVT
PIGKGQRGLIVAPPKTGKTMIMQAIANSITRNNPECHLMVVLVDERPEEVTDMQRSVKGE
VISSTFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSITRLGRAYNLAAPASGRILS
GGVDSTALYPPKRFFGAARNIEDGGSLTILATALVETGSRMDEVIFEEFKGTGNLELKLD
RKLSDKRIFPAVDVDASSTRKEEILMGSDELAIVWKLRRVLHALDQQQAIELLLDKMKQT
KSNAEFLLQIQKTTPTTGNGND
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgcgcgcaccgatggcagtgccaccacgcccgcc
acggacgctcccgccgcgcctgccaccacgcgacgccgccgctccggcaccggccttgag
ggcatggtcctggcagagctccagcagattgcctccggcctcggtatcaagggcaccgcg
cggatgcgcaagagccagctgatcgaggtcatcaaggagaagcaggctgccggctccggg
gccgctgccaaggccgacgcgcccgcagacaccgagaccaagcccaagcgccgcacgacc
tccaaggcccgcacgggcgaggacggcgctgagccggcggccaaggccgccaagtcgacc
aaggccgcggacaagtccgggacgcaagcgcagatcgacatcccgggccagccgtccccc
aaggtctcgactgcgctcgaccagggaggtgcccccaccgacgaggcgccggccggcgag
cgtcgccgtcgccgggccaccgcccccgcgggcagcccggacgccgacgtccgcaccgag
gccaaggtcgaggccgccaccgcggtcaagaccgaggtccgtaccgacaccgcggtcgcc
ccgcaggaggccggcgagggccggtccgtcaagggcgccgagcgccaggaccgcggggac
cgccaggaccgcggccagaagggcgagcgcggtcggcgcgaccgcgaccgcgatcgtgac
cgcgaccgtcgtaagaccgacgcgggcgacagcggtcagggcggcaaccgccagcgggac
cgccgggacggcggcgacgacgaggacttcgagggcggccggcgcggtcggcgcggccgt
taccgcgaccgccgcgggcgccgtggccgcgaggacttcgccggtgagccgcaggtggcc
gaggacgacgtgctgatcccggtcgcgggcatcctcgacatcctcgacaactacgcgttc
atccggacctccggctacctgcccggtccgaacgacgtgtacgtctcgctcgcccaggtc
cgcaagaacggcctgcgcaagggcgaccacgtcaccggcgcggtccgccagcccaaggac
ggcgagcggcgcgagaagttcaacgccctggtgcgactggacagcgtcaacagcatggcg
cccgaacagggccgccagcggccggagttcgggaagctgacgcccctttacccgcaggag
cgactgcgcctggagggcgagtcgggcggcctgacgacccggatcatcgacctggtcacg
ccgatcggcaagggccagcgtggtctgatcgtggccccgccgaagaccggcaagaccatg
atcatgcaggcgatcgccaactcgatcacccgcaacaaccccgagtgccacctgatggtc
gtcctcgtcgacgagcgtccggaagaggtcaccgacatgcagcggtccgtcaagggcgag
gtcatctcctcgaccttcgaccgcccggccgaggaccacaccaccgtcgccgagctcgcc
atcgagcgcgccaagcgtctggtcgagctcggtcacgacgtggtcgtgctgctggactcc
atcacccgcctgggccgcgcgtacaacctcgcggcgcccgcctccggccgcatcctgtcc
ggtggtgtcgactcgaccgcgctctacccgccgaagcgcttcttcggtgccgcgcgcaac
atcgaggacggcggttcgctgaccatcctggccaccgcgctggtcgagaccggctcgcgg
atggacgaggtgatcttcgaggagttcaagggcaccggcaacctggagctcaagctcgac
cgcaagctctccgacaagcgcatcttccccgcggtggacgtggacgcgtccagcacccgt
aaggaggagatcctgatgggcagcgacgagctggccatcgtctggaagctgcgtcgggtg
ctgcacgcactggaccagcagcaggccatcgagctgctgctggacaagatgaagcagacg
aagtccaacgcggagttcctgctccagatccagaagacgacgccgaccacgggcaacggc
aacgactga
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