Streptomyces sp. 769: GZL_04884
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Entry
GZL_04884 CDS
T03587
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
stre
Streptomyces sp. 769
Brite
KEGG Orthology (KO) [BR:
stre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stre03019
]
GZL_04884
Enzymes [BR:
stre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GZL_04884
Messenger RNA biogenesis [BR:
stre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GZL_04884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_19
AAA_22
nSTAND3
AAA_16
T2SSE
NACHT
AAA_25
ResIII
SLFN-g3_helicase
PhoH
NTPase_1
SRP54
Motif
Other DBs
NCBI-ProteinID:
AJC57461
UniProt:
A0A0A8ETX6
LinkDB
All DBs
Position
complement(5262393..5266412)
Genome browser
AA seq
1339 aa
AA seq
DB search
MSSQPASALSDGAAPTLPSLLKRLPELMLRDQQRLGRRIDGARRIRKPEARAAVLAEIAA
GLDEAELRVAQRRAAMPAVSYPEELPVSQKRDDILAAIRDHQVVIVAGETGSGKTTQIPK
ICLELGRGVQGLIGHTQPRRIAARTVAERVAEELKTPLGEAVGWKVRFTDQVGDDTLVKL
MTDGILLAEIQTDRELRQYDTIIIDEAHERSLNIDFILGYLAQLLPRRPDLKIVITSATI
DPERFSRHFGDAPIVEVSGRTYPVEVRYRPLLEEGGQDPDRDQITAICDAVDELQAEGPG
DVLVFLSGEREIRDTADALNKKNLPATEVLPLYARLSHAEQHRVFQRHTGRRIVLATNVA
ETSLTVPGIKYVIDPGMARISRYSFRTKVQRLPIEPVSQASANQRKGRCGRTSDGICIRL
YSEDDFLTRPEFTDAEILRTNLASVILQMTAAGLGDIEKFPFIDAPDRRNIKDGVDLLRE
LGALDTAQQDTRKRLTPLGRKLSQLPVDPRLARMVLEAERNGCVREVMVIAAALSIQDPR
ERPSDKQQQADQQHARFKDEASDFLAFLNLWGYVREQQKALSSSAFRRMCRSEFLNYLRI
REWQDIYSQLRTVAKSMGVHLNETDAAPEHIHTSLLSGLLSHIGLKDTDAKNEYLGARSA
KFAVFPGSALFKKPPRWVMSAELVETSRLWARVNARIEPEWIEPLAQHLVKRNYSEPHWE
QKMAAVMAYERVTLYGVPIVAQRKVNYGRIDPEVSRDLFIRNALVEGDWRTHHQFFHDNR
KLLGEVEELEHRARRRDILVDDETLFDFYDQRIPADVVSGAHFDSWWKKQHREDPDLLNF
EHSMLINESAEAVTKDDYPDSWRQGKLKFKVTYQFEPGADADGVTVHIPLQVLNQVASEG
FDWQIPGLREQLVTELIRSLPKPIRRNYVPAPNFAARFLDTTVPLQGALTTSLAAGLQRM
VGVPVEAADFDLAKVPDHLKITFRVYDAASQSGSAAGRRKLAEAKDLEALRLQLKPKTQA
AISRAFEQAAERPGKDRRGGRRETPLAGPEQRTGLTSWTVGTLPRTFETRRAGQPVKAYP
ALVDEGSSVAVRLFDTEAEQVSAMWAGTRRLILAGIPTNPAKFAQDKLSNQQKLALSRNP
HGSIAALFEDCVTAAADRLIAARGGPVWDEESFRKLFDAVRADLVEATLKTIQQVQEVLA
AWQACERRLKATAFPSLLPSLADVKEQLAALIKPGFVTAHGTKRLPDLMRYLVAVDRRLT
QLPTNAERDRSRMAKVKEMQDEYAWLLEQFPQGRPVPAAAREIRWMIEELRVSYFAHALG
TAYPVSDKRIMKAVDAAAP
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtcagcctgcctccgccctgtccgacggtgccgcccccacgctgccctccctg
ctgaagcgacttcccgagctgatgctgcgcgaccagcagcggctggggcgccggatcgac
ggcgcgcgccggatccgcaagcccgaagcccgggcggcggtgctcgccgagatcgccgcc
ggcctcgacgaggcggagctgcgtgtggcgcagcggcgcgccgcgatgccggcggtgagc
tatccggaggaactcccggtcagccagaagagggacgacatcctggcggccatccgcgac
caccaggtggtgatcgtcgcgggcgagaccggctccggcaagaccacccagatccccaag
atctgtctggagctggggcgcggcgtccaggggctgatcgggcacacccagccgcgtcgg
atcgcggcccgtacggtcgccgagcgggtggccgaggagctgaagacaccgctgggcgag
gcggtcggctggaaggtccgcttcaccgaccaggtcggcgacgacaccctcgtcaagctg
atgacggacggcatcctgctcgccgagatccagacggaccgggagctgcgccagtacgac
acgatcatcatcgacgaggcgcacgagcgcagcctcaacatcgacttcatcctgggctac
ctggcgcagctgctgcccaggcgcccggatctgaagatcgtcatcacctccgcgacgatc
gaccccgagcggttctcccggcatttcggggacgcgccgatcgtcgaggtctccgggcgg
acgtacccggtcgaggtgcgctaccggccgctgctggaggagggcggtcaggaccccgat
cgcgaccagatcaccgcgatctgcgacgcggtggacgagctccaggccgagggccccggc
gacgtcctggtcttcctctccggtgagcgggagatccgcgacaccgcggacgcgctgaac
aagaagaacctccccgccacggaggtgctgccgctctacgcccggctgtcgcacgccgag
cagcaccgggtcttccagcgccatacgggccggcggatcgtgctggccacgaacgtggcc
gaaacctcgctgaccgtccccggcatcaagtacgtgatcgacccgggcatggcccggatc
tcccggtacagcttccgcaccaaggtgcagcggctgccgatcgagccggtgtcgcaggcc
agcgccaaccagcgcaagggccgctgcggccggaccagcgacggcatctgcatccggctg
tactcggaggacgacttcctgacccgcccggagttcaccgacgcggagatcctccggacc
aacctcgcctccgtcatcctccagatgaccgcggccggcctcggcgacatcgagaagttc
ccgttcatcgacgcgccggaccgccgcaacatcaaggacggcgtcgatctgctgcgcgag
ctgggcgcgctggacaccgcgcagcaggacacccgcaagcggctgaccccgctgggccgc
aagctctcccagctgccggtggacccgcggctggcccggatggtgctggaggcggagcgc
aacggctgtgtccgcgaggtcatggtgatcgcggcggcgctgtccatccaggacccgcgc
gagcggccgtcggacaagcagcagcaggccgaccagcagcacgcccgcttcaaggacgag
gcgtcggacttcctggcgttcctcaacctctggggctacgtccgcgagcagcagaaggcg
ctgtcctcgtccgccttccgccggatgtgccgatcggagttcctgaactacctgcggata
cgcgaatggcaggacatctattcgcagctgcggacggtcgccaagagcatgggcgtccac
ctgaacgagacggacgcggcgccggagcacatccacacgtcattgctctccggtttgctt
tcgcacatcggactgaaggacacggacgccaagaacgagtacctgggcgcccgcagcgcg
aagttcgcggtgttccccggctccgcgctcttcaagaagccgccgcgctgggtgatgtcc
gcggagctggtcgagacctcccggctgtgggcgcgggtgaacgcccggatcgaaccggag
tggatcgagccgctggcccagcatctggtgaagcggaactacagcgagccgcactgggag
cagaagatggccgcggtgatggcgtacgagcgggtgacgctctacggcgtcccgatcgtg
gcccagcgcaaggtcaactacgggcggatcgaccccgaggtctcccgtgacctgttcatc
cggaacgccctggtggagggcgactggcgcacccaccaccagttcttccatgacaaccgc
aaactcctcggcgaggtcgaggagttggagcaccgcgcccggcgccgcgacatcctcgtc
gacgacgagacgctcttcgacttctacgaccagcggatcccggcggacgtggtttccgga
gcgcacttcgactcctggtggaagaagcagcaccgggaggacccggacctgctgaacttc
gagcactcgatgctcatcaacgagtccgccgaggccgtcaccaaggacgactacccggac
tcctggcggcaggggaagctgaagttcaaggtcacctaccagttcgagccgggcgcggac
gcggacggcgtgaccgtccacatcccgctccaggtcctcaaccaggtcgcctccgagggc
ttcgactggcagatcccgggcctgcgcgagcagttggtgaccgagctgatccgttcactg
cccaagccgatccgccgcaactacgtcccggcgccgaacttcgccgcccgtttcctggac
accaccgtccccctccagggcgccctgacgacgtcgctggccgccggcctgcagcggatg
gtgggggtaccggtggaggccgcggacttcgacctcgccaaggtcccggaccacctgaag
atcaccttccgggtgtacgacgccgcctcccaaagcggctccgccgcgggccgccgcaag
ctcgccgaggccaaggacctggaggcgctgcggctccagctgaagccgaagacccaggcc
gccatctcccgggccttcgagcaggccgccgagcggcccggcaaggaccgcaggggcggc
cggcgggagaccccgctggccggtccggagcagcgcaccggcctgacgtcctggacggtc
ggcacgctgccgcgcaccttcgagacccgacgcgccggccagccggtgaaggcgtacccg
gcgctggtcgacgagggcagcagcgtcgcggtgcggctcttcgacaccgaggccgagcag
gtgtcggccatgtgggccggcacccgccgcctcatcctggcgggcatccccaccaacccc
gccaagttcgcccaggacaagctcagcaaccaacagaagctggcgctctcccgcaacccc
cacggctccatcgcggcgctcttcgaggactgcgtgaccgccgccgcggaccggctgatc
gcggcccggggcggcccggtgtgggacgaggagtcgttccgcaagctgttcgacgcggtg
cgggccgatctggtggaggcgacgctgaagaccatccagcaggtgcaggaggtgctggcc
gcctggcaggcgtgcgagcgccggctgaaggcgaccgccttcccctcgctgctgccgtcg
ctggcggacgtcaaggagcagctggccgcgctgatcaagccgggcttcgtgaccgcgcac
ggcaccaagcggctgccggatctgatgcgctacctggtcgccgtcgaccgccgcctgacg
cagctgcccaccaacgccgaacgggaccgcagccggatggcgaaggtgaaggagatgcag
gacgaatacgcctggctgctggagcagttcccccaggggcgtccggtgccggccgcggcc
cgggagatccgctggatgatcgaggaactccgggtgagctacttcgcgcacgccctgggg
acggcctacccggtctccgacaagcggatcatgaaggcggtggacgccgcggcgccgtag
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