Streptomyces sp. 769: GZL_05965
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Entry
GZL_05965 CDS
T03587
Name
(GenBank) RNA polymerase sigma (70) factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
stre
Streptomyces sp. 769
Pathway
stre02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
stre00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GZL_05965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stre03021
]
GZL_05965
Transcription machinery [BR:
stre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GZL_05965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_Crp_2
HTH_28
LexA_DNA_bind
KORA
DUF2316
Motif
Other DBs
NCBI-ProteinID:
AJC58538
LinkDB
All DBs
Position
6452029..6453210
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AA seq
393 aa
AA seq
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MQTRTLPAAPAGGAPAAPPDTGLLPAPVAVPQQAEPPAVELLAAEIPPEHPDAPDPADAA
DPADATDTTDATDTVDPTDTADPAPRPDTGGPSSDLFRQYLREIGRIPLLTAAEEVDLAR
RVEAGLFAEEKLTRTPDLDSQLAHDLDTLVVRGRIAKRRLIESNLRLVVSVAKRYVGRGL
TMLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVEL
INRVVRVQRRMLQERGYEPTHEEVAAHLGLTPERVTDVLRLAQEPVSLHAPVGEEDDVAL
GDLIEDGDAASPVESAAFLLLREHLDAVLSTLGERERKVVQLRYGLADGRPRTLEEIGRI
FGVTRERIRQIESKTLGKLRDHAFADQLRGYLD
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacccggaccctccccgccgcacctgccggcggcgcaccggccgccccgcccgat
accggcctgctgcccgcgccggtcgcggtgccgcagcaggccgaaccccccgccgtcgaa
ctcctcgccgcggagatccccccggagcaccccgacgccccggacccggccgacgcagcg
gacccggccgacgcgaccgacacgacggacgccacggacaccgtggaccccacggacacc
gcggaccccgcgccccgcccggacaccggcggcccctcctccgacctcttccgccagtac
ctccgcgagatcggccggatcccgctgctcaccgccgccgaggaagtcgacctggcccgc
cgcgtcgaagccggcctcttcgccgaggagaaactcacccgcacccccgacctcgactcc
caactcgcccacgacctcgacacgttggtggtccgcggccggatcgccaaacgccgcctg
atcgagtccaacctgcggctggtggtctccgtcgccaaacgctacgtcggccgcggcctg
accatgctcgacctcgtccaggagggcaacctcggactgatccgcgccgtcgagaagttc
gactacgcccgcggctacaagttctccacctacgcgacctggtggatccgccaggcgatg
tcccgcgccctcgccgaccaggcccgcaccatccgcgtcccggtccacgtcgtcgaactg
atcaaccgcgtcgtccgggtccagcgcaggatgctccaggaacgtggctacgaacccacc
cacgaggaggtggccgcccacctcggcctcacccccgaacgcgtcaccgacgtcctgcgg
ctggcccaggaaccggtctccctgcacgcccccgtcggcgaggaggacgacgtcgccctc
ggcgacctcatcgaggacggcgacgccgcctcacccgtggaatccgccgcgttcctgctg
ctccgcgaacacctcgacgcggtcctgtccaccctcggcgaacgcgaacgcaaggtcgtc
cagctccgctacggcctcgccgacggccgcccccgcaccctggaggagataggccggatc
ttcggcgtcacccgcgaacgcatccggcagatcgaatccaagaccctcggaaaactccgc
gaccacgccttcgccgaccagctccgcggctacctcgactga
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