Streptomyces sp. 769: GZL_06404
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Entry
GZL_06404 CDS
T03587
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
stre
Streptomyces sp. 769
Pathway
stre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GZL_06404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stre03400
]
GZL_06404
Enzymes [BR:
stre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GZL_06404
DNA repair and recombination proteins [BR:
stre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GZL_06404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AJC58974
LinkDB
All DBs
Position
complement(6895148..6896047)
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AA seq
299 aa
AA seq
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MSTPLSPEGAALRARARNPVGGHVPVAGGLAKVGLSYARQLGCEVVQVFVANPRGWATPP
GNPEQDAAFRERCAQDDIPAYVHAPYLINFGSHTPATVEKSVASLRHSLRRGREIGALGV
VVHTGSATGGRPRETALAQVREQVRPLLDELTRDDDPWLLLEPTAGQGSSLCALAEDLGP
YFDALDRHPRLGVCLDTCHAFAAGHDMAAPGGTKALLDELVEVTGEGRLKLIHANDSKDV
VGAHKDRHANIGAGHIGAEPFAALFAHPATDGVPLVIETPGGEEGHAADVARLKELRLP
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgagtactcccctgtcccccgagggcgccgccctgcgcgcccgcgcacgcaatccggtc
ggcggccatgtgccggtggccggcggcctggccaaggtgggcctgtcgtacgcccggcag
ctcggctgcgaggtcgtccaggtcttcgtcgccaatccgcgcggctgggcgacgccgccc
ggcaaccccgagcaggacgcggcgttccgcgagcgctgcgcccaggacgacatcccggcc
tatgtgcacgcgccgtacctgatcaacttcgggtcgcacaccccggcgacggtcgagaag
tccgtggcgtcgctgcgccactcgctgcgccgcggccgggagatcggcgcgctcggggtg
gtcgtgcacaccggctcggcgaccggcggacgcccgcgggagacggcactggcgcaggtc
agggagcaggtccggccgctgctggacgagctgacacgggacgacgacccctggctgctg
ctggagcccacggccggccagggctcctcgctgtgcgcgctggcggaggacctgggcccg
tacttcgacgcgttggaccggcatccccggctcggggtctgcctggacacctgtcacgcg
ttcgcggccgggcacgacatggcggcgccgggcgggacgaaggcgctgctggacgagttg
gtggaggtcaccggcgagggccggctgaagctgatccacgccaatgactccaaggacgtg
gtcggcgcgcacaaggaccggcacgcgaacatcggcgccggccacatcggcgcggagccg
ttcgccgcgctgttcgcgcatcccgcgacagacggcgtgccgttggtgatcgagaccccg
ggcggcgaggagggccacgccgcggacgtggcgcggctgaaggaactgcggctgccctga
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