Streptomyces sp. 4F: ASR50_00040
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Entry
ASR50_00040 CDS
T04265
Name
(GenBank) DNA exonuclease SbcCD subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
strf
Streptomyces sp. 4F
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strf03400
]
ASR50_00040
DNA repair and recombination proteins [BR:
strf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ASR50_00040
Archaeal homologous recombinant proteins
ASR50_00040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
ALV47976
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All DBs
Position
complement(12760..13959)
Genome browser
AA seq
399 aa
AA seq
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MRFLHTSDWHLGRRFHTEDLIPAQCAFLDHLAATARTEDVDAILVAGDIYDRAIPSLDAV
RLFNRALHQLADLGVPVIMISGNHDSAHRLGVGSGLLARAGIHLRTDPATCDAPVLLEDA
DGPVAVYGIPYLEPSMVRDRLEAEATSHHAVLTAALDRIHADLTNHQPAGTRSVVLAHAF
VTSGTGQPAERDEREESTSERDIAVGGVAHVGADVFDGIDYVALGHLHGPQRVTDRIHYS
GSPLAYSFSEARHTKSITLVDLTPNAAPTVTRRPCPAPLRLERVTGFMEDLLTSPAHEHL
KDAWLEVTLTDTALPFEAMARLRRRFPHTASLKHRPALIPAQATNTPTYSERIRGRSDLD
ITSDFINSMRGTDPTPDEHALLQQAVEASRLNEQQKETV
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttctgcacacttcggactggcacctgggccgccggttccacacagaagacctg
atccccgcccagtgcgccttcctcgaccacctggccgccaccgcccgaaccgaggacgtt
gacgcgatcctcgtggcaggcgacatctacgaccgggccatccccagcctcgacgccgta
cgcctcttcaaccgcgcactgcaccagctcgccgacctcggcgtgccggtcatcatgatc
agcggaaaccacgactccgcccaccgcctcggcgtcggatccggcctcctcgcccgagcc
ggcatccatctgaggaccgaccccgccacctgcgacgcccccgtcctcctcgaggacgcc
gatggcccagtcgccgtgtacggcatcccctacctcgagccatcgatggtccgcgaccgc
cttgaagcggaagccacctcccaccatgctgtgctgaccgcggccttggaccgcatccac
gccgacctcaccaaccaccagccggccgggacccggtccgtggtcctcgcccacgccttc
gtcacctccggcaccggacagcccgccgaacgcgacgaacgagaggagtccaccagcgaa
cgcgacatcgccgtgggcggggtcgcccacgtgggtgccgacgtcttcgacgggatcgac
tacgtggccctgggccacctccacggcccccagcgcgtcaccgaccgcatccactacagc
ggctcaccgctggcctactccttctccgaagcccgccacaccaagtcgatcaccctggtc
gacctcaccccgaacgccgcccccaccgtcacccgacggccctgccccgcgcccctccgc
ctggaacgcgtcaccggcttcatggaagacctcctgaccagccccgcccacgagcatctg
aaggacgcctggctcgaggtcaccctgaccgacaccgccctgcccttcgaagccatggcc
cgcctgcgccgccgcttcccccacaccgccagcctcaagcaccggcccgccctcatcccc
gcccaggccacgaacacccccacctacagcgaacgcatccgcggccgcagcgacctcgac
atcaccagcgacttcatcaacagcatgcgcggcaccgaccccaccccggacgaacatgcc
ctgctccagcaagccgtcgaagcctcccgcctgaacgagcagcagaaggaaaccgtctga
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