Streptomyces sp. 4F: ASR50_04150
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Entry
ASR50_04150 CDS
T04265
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
strf
Streptomyces sp. 4F
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strf03021
]
ASR50_04150
Transcription machinery [BR:
strf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ASR50_04150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
HTH_Crp_2
DUF7343
Sigma70_ECF
MarR_2
HTH_3
MarR
Motif
Other DBs
NCBI-ProteinID:
ALV48657
LinkDB
All DBs
Position
1000191..1000985
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AA seq
264 aa
AA seq
DB search
MRTVSPRKPHSHDDAPETARDFERLAGLPDGPERRRLRDELVTAWLPMAERIAVRFRGRG
EALEDLYQVAALGLVKAVDHYDPARGNAFEAYAVPTVTGEIKRHFRDHMWTLHVPRRVQD
LRNRVRTAAKELSQTTPGRPPTVAEIAAHARLTEDEVRTGMEALECFSALSLEAEMPGTD
GYALGDSIGGPDPAYDAVVDRVAVRPCLEALPERERLILYLRFFKGMTQSGIADQLGISQ
MHVSRLLSSCFAQVREELASADAG
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccgtgagtcccaggaagccccactcccatgacgacgcccccgagacggcgcgt
gacttcgagcgtctggccggtcttcccgacgggccggagcgccggaggctgcgcgacgag
ctggtcacggcgtggctgccgatggccgagcgcatcgccgtccggttccggggccgtgga
gaggccctggaggacctctaccaggtggcggccctgggtctggtgaaggccgtcgaccac
tacgacccggcgcgcggcaacgccttcgaggcgtacgcggtgccgaccgtcaccggggag
atcaaacgccacttccgcgaccacatgtggacgctgcacgtgccgcgccgggtgcaggac
ctgcgcaaccgggtgcgcaccgcggcgaaggagctgtcgcagaccacgccgggccgaccg
cccacggtcgccgagatcgccgcgcacgcccggctgacggaggacgaggtgcgcaccggg
atggaggccctcgagtgcttctccgcgctctcgctggaggcggagatgccgggcaccgac
gggtacgccctgggcgactcgatcggcggcccggacccggcgtacgacgccgtcgtggac
cgggtggcggtgcggccgtgcctggaggcgctgccggagcgcgagcggctcatcctctat
ctgcgcttcttcaagggcatgacgcagagcggcatcgccgaccagctcggcatctcccag
atgcatgtctcccgtctgctgagcagctgcttcgcgcaggtgcgcgaggagctggcgtcg
gccgacgcgggctga
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