Streptomyces sp. 4F: ASR50_04165
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Entry
ASR50_04165 CDS
T04265
Name
(GenBank) glycogen debranching protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
strf
Streptomyces sp. 4F
Pathway
strf00500
Starch and sucrose metabolism
strf01100
Metabolic pathways
strf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
ASR50_04165
Enzymes [BR:
strf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
ASR50_04165
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
DUF3459
Motif
Other DBs
NCBI-ProteinID:
ALV48660
LinkDB
All DBs
Position
complement(1002386..1004533)
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AA seq
715 aa
AA seq
DB search
MTRRNNRKGAPAWSGRPYPLGASYDGEGTNFALFSEVAERVDLILVDDDGRHRTVRLTEV
DGFVWHGYLPGVGPGRRYGYRVHGPWAPAAGHRCNPAKLLLDPYATAVDGQIDNHPSLYE
RNPHGPDPADSAGHTMLGVVTDPAFDWGDDERPCRPYSDTVIYETHVKGLTRTHPDVPPE
LRGTYAGLAHPSVIEHLTSLGVTAVELMPVHQFVQDGVLQGRGLANYWGYNTIGFFAPHN
AYSAHGTRGQQVTEFKEMVKALHAAGLEVILDVVYNHTAEGNEKGPTLSFRGIDNSSYYR
LVDGDWRHYYDTTGTGNSLLMRHPYVLQLIMDSLRYWVTEMHVDGFRFDLAATLARQFHE
VDRLSAFFDLIQQDPVISRVKLIAEPWDVGEGGYQVGNFPPLWSEWNGMYRDAVRDFWRG
EDHTLGEFASRLTGSSDLYAHHRRRPRASVNFVTAHDGFTLRDLVSYNDKHNEANGEDNQ
DGENDNRSWNCGAEGPTRDPAVRELRARQQRNFLATLLLSQGIPMLSHGDELGRTQRGNN
NAYCQDNEISWIDWRLGDDERGLADFTRRLISLRREHPVLRRRRFFRGETPRNADQPLPD
LVWLAPDAREMTDDDWQRADAHSVGVFLNGDAIAEPDPRGRPVIDDSFLLLLNSHWEPVG
FRLPDASYGERWTALIDTADPDGTPDEAERKAGTRLTVDARSLVLLSRPSRRAPR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcggcggaacaaccggaaaggggcgcctgcctggagcgggcgcccctacccgctg
ggcgcctcctacgacggcgagggcaccaacttcgcgctgttcagcgaggtcgccgagcgc
gtggacctgatcctcgtggatgacgacggccggcaccgcacggtccggctcaccgaggtc
gacggcttcgtctggcacggctacctgcccggcgtcggccccggccggcgctacggctac
cgcgtccacggcccctgggcccccgccgccggccaccgctgcaacccggcgaaactgctg
ctcgacccgtacgccaccgcggtcgacggccagatcgacaaccacccctcgctgtacgag
cggaacccgcacgggcccgacccggcggacagcgcgggccacaccatgctcggcgtggtg
accgaccccgccttcgactggggcgacgacgaacgcccctgccgcccgtactccgacacc
gtgatctacgagacccacgtcaagggactgacccgcacccaccccgacgtcccgccggaa
ctccgcggcacctacgccggactggcgcacccctcggtgatcgagcacctcacctcgctc
ggcgtcaccgcggtggaactgatgccggtgcaccagttcgtccaggacggcgtgctccag
ggccgaggcctcgccaactactggggctacaacaccatcggcttcttcgccccgcacaac
gcctactccgcccacggcacccgaggccaacaggtcacggagttcaaggagatggtgaag
gcgctgcacgcggccgggctcgaggtgatcctcgacgtcgtctacaaccacaccgccgag
ggcaacgagaagggccccaccctctccttccggggcatcgacaactcctcgtactaccgc
ctggtggacggcgactggcggcactactacgacaccaccggcaccggcaacagcctgctg
atgcgccacccctacgtgctgcagctcatcatggactcgctgcggtactgggtcaccgag
atgcacgtcgacggcttccgcttcgacctcgcggccaccctggcccggcagttccacgag
gtggaccggctgtcggcgttcttcgacctgatccagcaggacccggtgatcagccgcgtc
aagctcatcgcggaaccctgggacgtcggcgaaggcggctaccaggtcggcaacttcccg
cccctgtggtcggagtggaacggcatgtaccgggacgccgtacgggacttctggcggggc
gaggaccacaccctcggcgagttcgcctcccggctgaccggctcctccgacctgtacgcc
caccatcggcgccggccgcgcgccagcgtcaacttcgtcaccgcgcacgacggtttcacc
ctgcgcgacctggtctcgtacaacgacaagcacaacgaggccaacggcgaggacaaccag
gacggcgagaacgacaaccggtcctggaactgtggcgcggaggggccgacccgcgacccg
gccgtgcgggaactgcgcgcccgccagcagcgcaacttcctggccacgctgctgctgtcg
cagggcatcccgatgctctcccacggcgacgagctgggccgcacccagcgcggcaacaac
aacgcctactgccaggacaacgagatcagctggatcgactggcgcctcggcgacgacgag
cgcgggctggcggacttcacacgccggctgatctccctgcgccgggagcacccggtgctg
cgccggcgccggttcttccggggcgagaccccgcgcaacgcggaccagccgctgcccgac
ctggtgtggctggcgcccgacgcacgggagatgaccgacgacgactggcagcgcgccgac
gcgcactcggtcggcgtgttcctcaacggcgacgccatcgccgaaccggacccgcgtggc
cggccggtcatcgacgactcgttcctgctgctgctcaacagccactgggagccggtcggc
ttccgcctgccggacgcctcctacggcgaacggtggacggcgctgatcgacaccgccgac
ccggacggcacccccgacgaggcggaacgcaaggcgggcacccggctgaccgtggacgcc
cgcagcctggtgctgctgtcccgcccgtcccgccgcgccccacggtga
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