Streptomyces sp. 4F: ASR50_05580
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Entry
ASR50_05580 CDS
T04265
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
strf
Streptomyces sp. 4F
Pathway
strf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ASR50_05580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strf03400
]
ASR50_05580
Enzymes [BR:
strf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ASR50_05580
DNA repair and recombination proteins [BR:
strf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ASR50_05580
Prokaryotic type
ASR50_05580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALV48915
LinkDB
All DBs
Position
1298619..1299296
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AA seq
225 aa
AA seq
DB search
MAPRPLNEIVEAGWAQALEPVAGQIAAMGDFLRAEIAAGRTYLPAGANVLRAFQQPFDEV
RVLIVGQDPYPTPGHAVGLSFSVAPDVRPLPGSLINIFRELNSDLGLPQPSNGDLTPWTE
QGVLLLNRALTTAPRKPAAHRGKGWEEVTEQAIRALAARGKPLVSILWGRDARNCRPMLG
DLPAVESAHPSPMSADRGFFGSRPFSRANDLLIRQGGQPVDWRLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggcaccacgacccttgaacgagatcgtcgaagcgggctgggcgcaggccctcgaaccg
gtggcgggacagatcgccgcgatgggggacttcctccgcgcggagatcgccgcgggacgc
acctacctcccggcgggggcgaacgtcctgcgggccttccagcagcccttcgacgaggta
cgcgtcctgatcgtcgggcaggacccgtaccccacgccggggcacgcggtgggcctgagc
ttctccgtcgcccccgacgtgcgccccctgcccggcagcctgatcaacatcttccgcgag
ctgaacagcgacctgggcctgccccagccgtcgaacggcgacctgaccccgtggaccgag
cagggcgtgctgctgctcaacagggcgctgacgaccgctccgcgcaagccggccgcccac
cgcggcaagggctgggaggaggtcaccgagcaggcgatacgcgcgctcgccgcacgcggg
aagccgctggtctccatcctctgggggcgggacgcccgcaactgccgtcccatgctgggt
gatctgcccgccgtggagtcggcgcacccgtcgccgatgtccgcggaccgcgggttcttc
ggctcacggccgttcagccgggccaacgacctgttgatccgtcagggcgggcagccggtg
gactggcgcctgccgtga
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