Streptomyces sp. 4F: ASR50_06085
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Entry
ASR50_06085 CDS
T04265
Name
(GenBank) DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
strf
Streptomyces sp. 4F
Pathway
strf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ASR50_06085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strf03400
]
ASR50_06085
Enzymes [BR:
strf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
ASR50_06085
DNA repair and recombination proteins [BR:
strf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ASR50_06085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALV49004
LinkDB
All DBs
Position
1399983..1400483
Genome browser
AA seq
166 aa
AA seq
DB search
MPDVVADGLRVLFCGINPGLMTAATGHHFARPGNRFWPALHRSGFTPRLLPPSEQRELLT
YGLGITNVVARATARADELSAEEYREGGRELAVKVGRLRPRWLAVLGVTAYRAAFDDRAA
KVGPQVRTIGESRVWVLPNPSGLNAHWTPTALAEEFARLREAAEQE
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
gtgccggacgtggtcgcggacggtctgcgggtgctgttctgcggcatcaacccggggttg
atgacggccgcgaccggccatcacttcgcccgcccggggaaccgcttctggcccgcgctg
caccgctccggtttcaccccgcggctgctgccgccgtcggagcagcgggagctgctgacg
tacgggctgggcatcaccaacgtggtggcgcgggcgaccgcgcgggccgacgagctgagc
gccgaggagtaccgggagggcgggcgggagctcgccgtgaaggtgggccggctgcgtccg
cgctggctggccgtgctcggcgtgaccgcctaccgcgcggcgttcgacgaccgtgcggcc
aaggtggggccgcaggtgaggacgatcggcgagtcacgggtgtgggtgctgcccaatccc
agcgggctgaacgcgcactggacgccgactgcgctcgccgaggagttcgcgcggctgcgg
gaggcggcggagcaggagtga
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