Streptomyces sp. 4F: ASR50_06180
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Entry
ASR50_06180 CDS
T04265
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
strf
Streptomyces sp. 4F
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strf03400
]
ASR50_06180
DNA repair and recombination proteins [BR:
strf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ASR50_06180
Archaeal homologous recombinant proteins
ASR50_06180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
SMC_N
AAA_29
AAA
Motif
Other DBs
NCBI-ProteinID:
ALV49022
LinkDB
All DBs
Position
complement(1417826..1420816)
Genome browser
AA seq
996 aa
AA seq
DB search
MRLHRLDITAFGPFGTTQSVDFDALSAAGLFLLHGPTGAGKTSVLDAVCYALYGSVPGAR
QGGQGITLRSDHAAPATRTSVTLELTVAGRRLEITRQPPWERPKKRGSGTTTDKAQTWLR
ERDAATGAWKDLSRSHQEIGEEITQLLGMSREQFCQVVLLPQGDFARFLRADAEARGKLL
GRLFDTHRFAEVEKRLADRRRATEARVREGDAELLADAHRMQQAADGAMELPELSPGEPG
LADAVLTAAAVARSTAREQLTAAHCRLTTAESVRAEAGRALDEARERHRLQRRFTEARER
AERLRERSGDHDEDQARMDRARKAGTVAPALELRDSADAEQRRAAAAEQRARALLPASLA
DAGPEGLAAAARRAAEELGGLESARRAERRRTELLDERAGLDRQERADEEVREDAEAWLA
DWETTRTALQERIAHAQQAATRAGELAARRDTARARLEAARTRDRLTRDAEAAAEQAGAA
REEALAARQHWLDLKEQRLGGIAAELAAGLTDGAPCAVCGATEHPAPARRVAGHVDRGTE
ERALADVQHAEDRRAEADRRLAAVREELAAAGAGAGDAPAEQLARELDEAEREYARAREA
ASALHAAQEELRAAEREHELRTAAQRDAAVRAAARVGHRERLELERASLEQELAHARGDA
PSVAERARQLEREAALLTDAADAARTAEEAARRLKDADARLADAAFRAGFATPRAAAEAL
LDDDAHRRLQRRLDAWQDEEAAVRAVLAEPETAAAAQQPATDLAAAQEAAEAADRAVREA
ASARDAAARRCAELDRLSARAAASVRRLGPLRQEYDRVARMAALTAGTSAENERRMRLES
YVLAARLEQVAAAATVRLRRMSSGRYTLVHSDDRAGRGRSGLGLHVVDAWTGRERDTATL
SGGETFFASLALALGLADVVTDEAGGVRLDTLFIDEGFGSLDDQTLDEVLDVLDSLRERD
RSVGIVSHVPDLRRRIHAQLEVQKDRTGSRLRQRGT
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcaccgcctggacatcaccgccttcgggccgttcggcaccacccagagcgtg
gacttcgacgccctgtccgccgccggtctcttcctgttgcacggccccaccggagccggc
aagacctccgtcctggacgccgtctgctacgccctctacggctccgtccccggcgcccgc
cagggcggccagggcatcaccctgcgcagcgaccacgccgcgcccgccacccgcacctcc
gtcacccttgaactcaccgtcgccggacgccgcctggagatcacccggcagcccccgtgg
gagcgccccaagaagcgcggcagcggcaccaccaccgacaaggcgcagacctggctgcgg
gagcgcgacgccgccaccggggcctggaaggacctcagccgctcccaccaggagatcggc
gaggagatcacccagctgctcggcatgagccgcgagcagttctgccaggtggtactgctc
ccgcagggtgacttcgcgcggttcctgcgcgccgacgccgaggcccgcggcaagctgctg
ggccgcctcttcgacacccaccgcttcgccgaggtggagaagcgcctcgccgaccgccgc
cgcgccaccgaggcccgtgtgcgtgagggcgacgccgagctgctcgccgacgcccaccgc
atgcagcaggccgcggacggcgccatggagctgcccgagctgtcgccgggggagcccggc
ctcgccgacgccgtgctgaccgcggccgccgtggcccgcagcaccgcccgcgaacagctc
accgccgcccactgccgcctcaccaccgcggagtccgtccgcgccgaggcgggccgtgcc
ctggacgaggcgcgcgaacggcaccggctgcagaggcggttcaccgaggcgcgggagcgt
gccgaacggctgcgggagcggtccggcgaccacgacgaggaccaggcccgcatggaccgg
gcccgcaaggccgggaccgtcgcccccgcactggagctgcgggactccgccgacgccgag
cagcgccgcgctgccgccgccgagcagcgcgcccgcgccctcctccccgcctccctcgcg
gacgccggacccgaggggctcgccgcggcggcccgccgcgccgccgaggaactgggcggc
ctggagtcggcccgccgcgcggaacgccgccgcaccgagctcctcgacgagcgtgccgga
ctcgaccgccaggagcgcgccgacgaggaggtccgcgaggacgccgaggcgtggctcgcc
gactgggagaccacccgcaccgccctccaggagcgcatcgcgcacgcccagcaggccgcg
acccgcgccggggaactcgcggcgcggcgcgacaccgcccgcgcccgcctggaggccgcc
cgcacccgcgaccggctcacccgggacgcggaggccgccgccgagcaggcaggcgccgcc
cgcgaagaggccctcgccgcccggcagcactggctcgacctcaaggaacagcggctgggc
ggcatcgccgccgaactcgccgccggcctcaccgacggcgccccctgcgcggtctgcggg
gccaccgaacaccccgcccccgcccgcagggtcgcgggacacgtcgaccgcgggaccgag
gagcgcgccctcgccgacgtccagcacgccgaggaccggcgcgccgaggcggaccgccgg
ctcgccgccgtacgggaggagctggccgccgccggcgcgggcgccggggacgccccggcc
gagcagctggcccgtgaactcgacgaggcggagcgggagtacgcccgcgcacgcgaggcg
gcctccgcgctgcacgccgcccaggaggaactgcgcgccgccgaacgcgaacacgagctg
cgcaccgccgcccagcgcgacgcggccgtccgcgccgccgcccgcgtcggccaccgcgaa
cgactggaactcgaacgggcctcactggagcaggagttggcacacgcgcggggagacgcc
cccagcgtcgccgagcgcgcccggcaactcgaacgcgaggcggcgctgctcaccgacgcc
gccgacgccgcccgcaccgccgaggaggccgcccggcggctcaaggacgccgacgcacgc
ctcgccgacgccgccttccgcgccggattcgccaccccgagggccgccgccgaggccctc
ctcgacgacgacgcccaccggcggctgcagcgccggctggacgcctggcaggacgaggag
gccgccgtacgcgccgtcctcgccgaaccggagaccgcggccgccgcacagcagcccgcc
accgacctcgccgccgcccaggaggccgccgaggccgccgaccgcgccgtccgcgaggcc
gcctccgcgcgggacgccgccgcccgccgctgcgccgagctcgaccggctctccgcccgc
gccgccgcctccgtgcgccggctcggaccgctgcgccaggaatacgaccgggtggcgcgc
atggccgccctcaccgccggcacctcggcggagaacgaacgccggatgcgcctggagtcg
tacgtgctcgccgcgcgcctggagcaggtcgccgccgccgcgaccgtccggctgcgccgc
atgtcgtccggccgctacaccctcgtccactccgacgaccgcgcgggccgcggccgcagc
ggcctcgggctgcacgtcgtggacgcctggaccggccgggagcgcgacaccgccaccctc
tccggcggcgagaccttcttcgcgtccctcgccctcgcgctcggcctcgccgacgtggtg
accgacgaggcgggcggggtgcggctggacacgctcttcatcgacgagggcttcggcagc
ctcgacgaccagaccctcgacgaggtgctcgacgtcctcgactcgctgcgcgaacgcgac
cgcagcgtcggcatcgtcagtcacgtcccggacctgcgccgccgcatacacgcccagctg
gaggtccagaaggaccgcaccggctcccggctgcggcagcgcgggacctga
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