Streptomyces sp. 4F: ASR50_06185
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Entry
ASR50_06185 CDS
T04265
Name
(GenBank) DNA exonuclease SbcCD subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
strf
Streptomyces sp. 4F
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strf03400
]
ASR50_06185
DNA repair and recombination proteins [BR:
strf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ASR50_06185
Archaeal homologous recombinant proteins
ASR50_06185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_3
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
ALV49023
LinkDB
All DBs
Position
complement(1420813..1421976)
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AA seq
387 aa
AA seq
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MRFLHTSDWHLGRSFHRVGMLGAQAEFIGHLVSTVREREVDAVVVSGDVYDRAVPPLSAV
ELFDDALHRLADLGVPTVMISGNHDSARRLGVGAGLMGRAGIHLRTEPSACGTPVLLPDA
HGDVAFYGLPYLEPALVRDEFGVERAGHETVLAAAMDRVRADLAARPAGTRSVVLAHAFV
TGGEPSDSERDIAVGGVASVPAAVFDGVDYAALGHLHGCQTLTDRVRYSGSPLPYSFSEA
GHRKSMWLVDLAADGSVTAERVDCPVPRPLARIRGTLEELLADPALAPHEEAWVEATLTD
PVRPADPMARLAERFPHALALVFDPDRPPDDPDVSYARRLAGRDDQQIAEDFVAHVRGAG
PDAHERTVLRDAFDAVRADEAAREVAR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagattcctgcacacctccgactggcacctcggccggtccttccaccgggtcggcatg
ctcggcgcccaggccgagttcatcggccacctcgtctccaccgtgcgcgagcgcgaggtg
gacgcggtggtggtgtcgggggacgtgtacgacagggcggtgccgccgctctccgcggtc
gagctgttcgacgacgcgctgcaccggctcgccgacctcggcgtgcccacggtgatgatc
tccgggaaccacgactcggcccgccgcctcggcgtcggcgcgggcctcatgggccgcgcc
ggcatccacctgcgcaccgaaccctccgcgtgcggcacccccgtcctgctgcccgacgcg
cacggcgacgtcgccttctacggcctgccctacctggagcccgccctcgtgcgggacgag
ttcggggtggagcgggccgggcacgagacggtgctcgccgccgccatggaccgggtgcgc
gccgacctcgccgcccgcccggccggcacccgctccgtcgtcctcgcccacgccttcgtc
accggcggcgaaccgagcgacagcgaacgggacatcgcggtcggcggtgtcgcgtccgtg
cccgccgccgtgttcgacggcgtcgactacgcggcgctcggccacctgcacggctgccag
accctcaccgaccgcgtccgctactccggctccccgctgccgtactccttctccgaggcc
gggcaccgcaagtccatgtggctggtcgacctggccgccgacgggagcgtcaccgccgag
cgcgtcgactgccccgtgccccgccccctcgcccgcatccgcggcaccctcgaggagctg
ctcgccgaccccgcgctcgcgccgcacgaggaggcgtgggtcgaggcgaccctcaccgac
ccggtccgccccgccgaccccatggcccggctcgccgagcgcttcccgcacgccctcgcc
ctcgtcttcgacccggaccggccgccggacgaccccgacgtgtcctacgcccgccgcctc
gccggccgcgacgaccagcagatcgccgaggacttcgtcgcccatgtgcgcggcgccgga
cccgacgcgcacgagcgcaccgtgctgcgggacgccttcgacgccgtccgcgccgacgag
gccgcccgggaggtggcccgatga
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