Streptomyces sp. 4F: ASR50_08855
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Entry
ASR50_08855 CDS
T04265
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
strf
Streptomyces sp. 4F
Pathway
strf03030
DNA replication
strf03430
Mismatch repair
strf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ASR50_08855
03430 Mismatch repair
ASR50_08855
03440 Homologous recombination
ASR50_08855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strf03032
]
ASR50_08855
03400 DNA repair and recombination proteins [BR:
strf03400
]
ASR50_08855
Enzymes [BR:
strf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ASR50_08855
DNA replication proteins [BR:
strf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ASR50_08855
DNA repair and recombination proteins [BR:
strf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ASR50_08855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ALV49496
LinkDB
All DBs
Position
1995604..1996587
Genome browser
AA seq
327 aa
AA seq
DB search
MLEDLTATAASPTAWPAAYPQGYAVVDVETTGLARDDRIISAAVYRLDARGEVEDHWYTV
VNPERDPGPVWIHGLTSEMLEGAPLFQDIAAEFAARLEGRVLVAHNAVFDWQMIAREYAR
ARGEAPVKQRLCTIALSKELRLPLPNHKLESLAAHFGVVQRRAHHALDDARVLAEAFRPS
LRAAAAGGLRLPLHECRPLTEWSDRPRIGQQASYGGRAPSSWRPSRKRPACPYPNPGRYE
PGKRLKQGMRVAFSGDTSTERDLLEDRATEAGLHVATSLSRLTSLLVTNDPDSGTSKTVK
ARQYGTPVVDEAAFGQLLSDVEPASET
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagacctcaccgccacagccgcctcccccaccgcgtggccggccgcgtatccg
cagggatacgcggtcgtcgacgtggagacgacggggctggcccgggacgaccgcatcatc
tccgcggccgtctaccggctggacgcgcgcggcgaggtcgaggaccactggtacacggtg
gtcaacccggagcgcgacccgggcccggtgtggatacacggcctgacgagcgagatgctc
gagggcgcgcccctgttccaggacatcgcggcggagttcgccgcgcgcctggagggccgc
gtcctggtggcgcacaacgcggtgttcgactggcagatgatcgcccgcgagtacgcccgc
gcgcgcggcgaggctccggtgaagcagcgcctgtgcaccatcgcgctctccaaggagctg
aggctgccgctgcccaaccacaagctggagtcgctcgcggcgcacttcggcgtggtgcag
cgccgggcgcaccacgcgctggacgacgcgcgcgtgctggcggaggcgttccggcccagt
ctgcgggccgcggcggcgggcggcctccggctgccgctgcacgagtgccggccgctcacc
gagtggtcggaccgtccccgcatcgggcagcaggcgtcctacggcgggcgggcgccctcc
agttggcgccccagccgcaaaagacccgcatgcccctatcccaacccgggacggtacgaa
ccgggcaagcgtctcaagcagggcatgcgggtggcgttctccggcgacacgtccaccgag
cgcgacctcctggaggaccgggcgaccgaggcggggctgcacgtggcgacgagcctgtcc
cggctcaccagcctgctggtgaccaacgacccggactcgggcacgtcgaagacggtcaag
gcccgccagtacggcacgccggtggtcgacgaggccgccttcggccagctcctctccgac
gtcgagcccgcctcggagacctga
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