Streptomyces sp. 4F: ASR50_09155
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Entry
ASR50_09155 CDS
T04265
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
strf
Streptomyces sp. 4F
Pathway
strf00040
Pentose and glucuronate interconversions
strf01100
Metabolic pathways
strf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ASR50_09155
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ASR50_09155
Enzymes [BR:
strf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
ASR50_09155
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Motif
Pfam:
Pectate_lyase_4
Fil_haemagg_2
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ALV49550
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Position
complement(2062847..2064172)
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AA seq
441 aa
AA seq
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MNVHVWHGHARRVGVLAGCTALVLGLTCTTAQAHTPSHRDPARRTLPAGDGWASHGSGTT
GGAAADAAHVRTVTDWAQFTAALTEGGDAPRIIKVKGTIDAVADGCDALAVPGYDFDAYL
EAYAPETWGLERDLTDEPDDSPEGLRRASAAHQDAAIKVNVPSDTTIIGVGRDAAIKGAS
LQIKDVDNVIVRNLTLESPVDCFPQWDPTDGDRGNWNSEYDTVVVYGSTHVWLDHNTFTD
GAHPDSAAPTHFGMLYQQHDGELDIVKGANHVTASWNVFTEHDKTILIGNSDSESTAVGD
RGKLKATFHHNLFEDLTERTPRVRFGQVDVYNNHFVAGSGYGYSFGVGKESQLVAEHNAF
TLPRGVSPAKVLKRWNDAPLTARHNLVDGRPVDLIAVHNAEIPEETLRSGAGWTPTLRRT
VHPAWAVPALVRLGAGAGRLR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttcatgtatggcatgggcatgccaggagagtcggtgtgctggccggctgcacc
gccctcgtgctgggcctgacctgcaccaccgcccaggcccacaccccatcgcaccgcgac
cccgcccgccggacgctgcccgcgggcgacggctgggcgtcccacggctcgggcacgacc
ggaggcgccgccgccgacgccgcacacgtccgtaccgtgaccgactgggcccagttcacc
gccgccctcacggagggcggggacgccccgaggatcatcaaggtgaagggcaccatcgac
gccgtcgccgacggctgcgacgcgctcgccgtccccggttacgacttcgacgcctacctg
gaggcgtacgcccccgagacctggggcctggagcgtgacctcaccgacgagcccgacgac
agccccgaggggctgcgccgcgcctccgctgcccaccaggacgcggcgatcaaggtgaac
gtcccctccgacaccacgatcatcggcgtgggacgcgacgccgcgatcaagggcgccagc
ctccagatcaaggacgtcgacaacgtcatcgtccgcaacctcaccctggagagccccgtc
gactgcttcccgcagtgggaccccaccgacggcgaccgcggcaactggaacagcgagtac
gacaccgtcgtcgtgtacggctcgacccatgtgtggctggaccacaacaccttcaccgac
ggcgcgcaccccgacagcgcggcccccacccacttcggcatgctctaccagcagcacgac
ggcgagctggacatcgtcaagggcgccaaccacgtcaccgcctcctggaacgtgttcacc
gagcacgacaagacgatcctcatcggcaacagcgacagcgagtccaccgccgtgggcgac
cggggcaagctgaaggcgaccttccaccacaacctgttcgaggacctcaccgagcgcacc
ccgcgtgtccgcttcgggcaggtcgacgtctacaacaaccacttcgtggccggctccggg
tacggctacagcttcggcgtcggcaaggagtcccagctcgtcgccgagcacaacgcgttc
accctgccccggggggtcagcccggcgaaggtcctcaagcgctggaacgacgcgcccctc
accgcccggcacaacctggtcgacggcaggccggtcgacctgatcgccgtgcacaacgcg
gagatccccgaggagaccctgcgctccggcgccggctggacgcccacgctgcgcaggacc
gtgcaccccgcctgggccgtgcccgccctggtccgtctcggcgcgggcgccggccgcctc
cgctga
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