Streptomyces sp. 4F: ASR50_13310
Help
Entry
ASR50_13310 CDS
T04265
Name
(GenBank) transporter
KO
K10439
ribose transport system substrate-binding protein
K10440
ribose transport system permease protein
Organism
strf
Streptomyces sp. 4F
Pathway
strf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ASR50_13310
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
ASR50_13310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
strf02000
]
ASR50_13310
Transporters [BR:
strf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
ASR50_13310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
BPD_transp_2
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
ALV50286
LinkDB
All DBs
Position
3007252..3009210
Genome browser
AA seq
652 aa
AA seq
DB search
MATDTLKSKPGAQGGATGGLRRLLLDNGALTALIVLVIAMSALSGDFLTADNLLNVGVQA
AVTAILAFGVTFVIVSAGIDLSVGSVAALSATVLAWSATEAGIPVALAVVLAVLTGIACG
LVNGFLVSYGKLPPFIATLAMLSVARGLSLVISQGSPIAFPDSVSHLGDTLGGWLPVPVL
VMVVMGLLTAFVLGRTYIGRSMYAIGGNEEAARLSGLRVKKQKLAIYAFSGLFAAAAGIV
LASRLASAQPQAAQGYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLSV
SAFWQQVVIGVVIALAVLFDTVRRKAGAGAPAAGASGGGNKGKQALTYVIAAVVAVAVVG
ATSLLHGGSSATAKPKIGLSLSTLNNPFFVQIRDGAEEEAKKLGVDLTVTDAQNDASQQA
NQLQNFTSGSLDAVVVNPVDSDAAGPSVRGANKADIPVVAVDRGVNKADTSALVASDNVE
GGALGAKALAEKLGGKGTIVILQGQAGTSASRERGAGFAEGLKDYPGIKVVAKQPADFDR
TKGLDVMTNLLQAHPDINGVFAENDEMALGAIKALGSKAGKSVQVVGFDGTPDGLKAVEA
GTLYASVAQQPSELGRIAVRNALRAADGEKVEKMVKVPVKVVTKENVAGFEG
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
gtggccactgacacgctcaagagcaagccgggcgcgcagggcggcgccaccggcggcctg
cgccggctgctcctcgacaacggcgcgctgaccgcgctgatcgtcctcgtcatcgccatg
tcggcgctgtccggggacttcctcaccgccgacaacctgctcaacgtcggcgtccaggct
gccgtgaccgcgatcctcgcgttcggcgtcaccttcgtcatcgtctcggcgggcatcgac
ctgtcggtcggctcggtcgccgcgctgtccgcgaccgtgctggcgtggagcgcgacggag
gccgggatcccggtggccctcgcggtcgtcctcgcggtgctgaccggcatcgcctgcggc
ctggtcaacggcttcctcgtctcgtacggcaaactcccgccgttcatcgccaccctggcg
atgctgtcggtggcgcgcggcctgtcgctggtgatctcgcagggctcccccatcgccttc
cccgactccgtctcccacctcggcgacacgctcggcggctggctgccggtgccggtgctc
gtgatggtcgtcatgggtctgctgaccgcgttcgtcctgggccgcacgtacatcggccgg
tccatgtacgcgatcggcggcaacgaggaggccgcgcgcctgtccggcctgcgggtgaag
aagcagaagctcgccatctacgccttctccggcctgttcgcggccgccgcgggcatcgtg
ctcgcctcccggctggcgtccgcgcagccgcaggccgcgcagggctacgagctggacgcg
atcgccgcggtcgtcatcggcggcgcctccctcgcgggcggcaccggcaaggcgtccggc
accctgatcggcgcgctgatcctcgcggtgctgcgcaacggcctcaacctgctgtcggtg
tccgcgttctggcagcaggtcgtcatcggcgtggtcatcgcgctggcggtgctgttcgac
acggtgcgccgcaaggcgggcgcgggcgctccggcggccggcgcgtccggcggcgggaac
aagggcaagcaggcactgacgtacgtgatcgcggccgtcgtcgccgtcgcggtcgtcggc
gccacctcgctgctgcacggcggctcgtccgcgacggccaagccgaagatcggcctgtcc
ctgtcgacgctcaacaacccgttcttcgtgcagatccgggacggcgccgaggaggaggcg
aagaagctgggcgtcgacctgaccgtcaccgacgcgcagaacgacgcctcccagcaggcc
aaccagctgcagaacttcaccagcggctcgctggacgcggtcgtcgtcaacccggtggac
tccgacgcggccggcccctcggtgcgcggcgcgaacaaggcggacatcccggtggtcgcc
gtggaccgcggcgtgaacaaggcggacacctccgcgctggtggcctccgacaacgtcgag
ggcggcgcgctcggcgccaaggcgctcgccgagaagctcggcggcaagggcaccatcgtg
atcctccagggccaggcgggcacctccgccagccgtgagcgcggggcgggcttcgccgag
ggcctgaaggactacccgggcatcaaggtcgtcgccaagcagcccgcggacttcgaccgc
accaagggcctggacgtgatgacgaacctgctccaggcgcaccccgacatcaacggcgtc
ttcgccgagaacgacgagatggcgctcggcgcgatcaaggcgctcggctccaaggccggg
aagtcggtgcaggtggtcggcttcgacgggacgccggacgggctgaaggcggtcgaggcg
ggcacgctgtacgcctccgtcgcccagcagccgagcgaactcggccggatcgccgtgcgg
aacgcgttgcgggccgccgacggcgaaaaggtggagaagatggtgaaggtcccggtgaag
gtggtcacgaaggagaacgtggccggcttcgaaggctga
DBGET
integrated database retrieval system