Streptomyces sp. 4F: ASR50_17480
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Entry
ASR50_17480 CDS
T04265
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
strf
Streptomyces sp. 4F
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strf03021
]
ASR50_17480
Transcription machinery [BR:
strf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ASR50_17480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
Sigma70_ECF
MarR
HTH_24
DUF7343
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ALV51027
LinkDB
All DBs
Position
complement(3933077..3933979)
Genome browser
AA seq
300 aa
AA seq
DB search
MSAEQGSSKVLTLAESESAPHALDALGPIDEGPALAAAPAPEVPETAALDTRTLSRSLFL
RLAVLDEDSPERAYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFD
CERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKAGDELSQKLDRSPTV
SELAAVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLGYEDTALEGVEYR
ESLKPLLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLISD
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaacagggcagctcgaaggtgctcacgctcgcggagagcgagtcagctccc
catgctctcgacgcactcggccccatcgacgagggcccggccctcgccgccgcacccgct
ccggaggtcccggagacggcggccctcgacacccgcaccctgtcccgctccctgttcctg
cggctcgccgtcctcgacgaggacagcccggagcgcgcgtacgtccgggacacgctgatc
gagctcaacctcccgctcgtgcggtacgcggcggcgcggttccgctcgcgcaacgagccg
atggaggacatcgtccaggtcggcacgatcgggctgatcaaggcgatcgaccgcttcgac
tgcgaacggggcgtggagttcccgacgttcgcgatgccgacggtggtcggggagatcaag
cggttcttccgcgacacgtcctggtcggtgcgggtgccgcgccggctccaggagctgcgg
ctggcgctgaccaaggccggcgacgagctctcccagaagctggaccgctccccgacggtg
agcgagctcgccgccgtgctgggcgtgtccgaggaggacgtcgtcgacggcctcgcggtg
gggaacgcgtacacggcgtcctcgctggactcccccgcgcctgaggacgacggcggcgag
ggctccctggcggaccgcctcggctacgaggacacggcgctggagggcgtggagtaccgg
gagtcgctgaagccgctgctggcgaagctgccgccgcgtgagcggcggatcatcatgctg
cggttcttcgcgaacatgacgcagtcgcagatcggggaggaggtgggcatctcgcagatg
catgtctctcgtctgctgacgcgcaccttggcccagctgcgggaggggctcatctcggac
tga
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