Streptomyces sp. 4F: ASR50_18530
Help
Entry
ASR50_18530 CDS
T04265
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
strf
Streptomyces sp. 4F
Pathway
strf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASR50_18530 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strf03019
]
ASR50_18530 (groEL)
03110 Chaperones and folding catalysts [BR:
strf03110
]
ASR50_18530 (groEL)
03029 Mitochondrial biogenesis [BR:
strf03029
]
ASR50_18530 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
strf04147
]
ASR50_18530 (groEL)
Enzymes [BR:
strf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ASR50_18530 (groEL)
Messenger RNA biogenesis [BR:
strf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ASR50_18530 (groEL)
Chaperones and folding catalysts [BR:
strf03110
]
Heat shock proteins
HSP60 / Chaperonin
ASR50_18530 (groEL)
Mitochondrial biogenesis [BR:
strf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ASR50_18530 (groEL)
Exosome [BR:
strf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ASR50_18530 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
ASR50_18530 (groEL)
Exosomal proteins of breast cancer cells
ASR50_18530 (groEL)
Exosomal proteins of colorectal cancer cells
ASR50_18530 (groEL)
Exosomal proteins of bladder cancer cells
ASR50_18530 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5021
CbiA
DUF4844
Motif
Other DBs
NCBI-ProteinID:
ALV51202
LinkDB
All DBs
Position
4141064..4142686
Genome browser
AA seq
540 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPMALKRGIE
KAVEAVSAALLEQAKDVETKEQIASTASISAADVQIGELIAEAMDKVGKEGVITVEESQT
FGLELELTEGMRFDKGYISAYFATDMERMEAVLDDPYILIANSKISNVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGEVIS
EEVGLKLENATVDLLGKARKVVITKDETTIVDGAGSADQVQGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
SQVFEKLELEGDEATGANAVKLALEAPLKQIAVNGGLEGGVVVEKVRNLTVGHGLNAATG
EYVDMIAEGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAAPAGGGMPGGDMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcgcggcgcggcctcgagcgcggcatgaac
cagctcgcggacgccgtgaaggtgacgctcggccccaagggccgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtctccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgccgagctggtcaaggaagtcgccaagaagacg
gacgacgtcgccggtgacggtacgaccaccgcgaccgtcctcgcccaggccctggtcaag
gagggcctgcgcaacgtcgccgccggcgccaacccgatggccctgaagcgcggtatcgag
aaggccgtcgaggccgtctccgccgccctgctcgagcaggcgaaggacgtggagaccaag
gagcagatcgcctccaccgcctccatctccgccgccgacgtccagatcggcgagctcatc
gccgaggccatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagtcccagacc
ttcggtctggagctggagctcaccgagggtatgcgcttcgacaagggctacatctcggcg
tacttcgccaccgacatggagcgtatggaggccgtcctcgacgacccgtacatcctgatc
gccaactccaagatctccaacgtcaaggacctgctcccgctcctggagaaggtcatgcag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcgaccctg
gtggtcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggccccgggcttcggc
gaccgccgcaaggccatgctcggcgacatcgccatcctcacgggcggcgaggtcatctcc
gaggaggtcggcctcaagctggagaacgccaccgtcgacctgctgggcaaggcccgcaag
gtggtcatcaccaaggacgagaccaccatcgtcgacggcgccggctccgccgaccaggtc
cagggccgcgtgaaccagatccgcgccgagatcgagaacagcgactcggactacgaccgc
gagaagctgcaggagcgcctggcgaagctcgccggcggtgtcgcggtcatcaaggccggc
gccgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtgcgcaac
gccaaggcggccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctccaggcc
tcccaggtgttcgagaagctggagctcgagggtgacgaggcgaccggcgccaacgccgtg
aagctcgccctggaggccccgctgaagcagatcgccgtcaacggtggtctcgagggcggc
gtcgtcgtggagaaggtccgcaacctcacggtcggccacggtctgaacgccgcgaccggc
gagtacgtcgacatgatcgccgaaggcatcatcgacccggccaaggtgacgcgctccgcg
ctgcagaacgccgcgtcgatcgccgcgctgttcctcaccaccgaggccgtcatcgccgac
aagccggagaaggccgcggccccggccggcggcggcatgcccggcggtgacatggacttc
tga
DBGET
integrated database retrieval system
