Streptomyces sp. 4F: ASR50_21570
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Entry
ASR50_21570 CDS
T04265
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
strf
Streptomyces sp. 4F
Pathway
strf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ASR50_21570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strf03021
]
ASR50_21570
03400 DNA repair and recombination proteins [BR:
strf03400
]
ASR50_21570
Enzymes [BR:
strf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ASR50_21570
Transcription machinery [BR:
strf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ASR50_21570
DNA repair and recombination proteins [BR:
strf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ASR50_21570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ALV51740
LinkDB
All DBs
Position
4789444..4790466
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgttgaccgaagaggtcgtcgacgaattccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctccgccgc
accctcctgtcgtcgatccccggtgccgctgtcaccagcatccgcatcgacggcgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctgatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggcccgggtctggtcaccgccgccgacatcgcgcccccggccggtgtcgaggtgcacaac
ccggacctcgtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtgcagaacaagcaggtcggccaggagatcggc
cgtatcccggtcgactcgatctacagccccgtgctgaaggtcacctacaaggtcgaggcg
acccgagtcgagcagcgcaccgacttcgacaagctcatcgtcgacgtcgagaccaagcag
gcgatgcgtccgcgtgacgccatggcctccgccggcaagaccctggtcgagctgttcggt
ctcgcccgcgagctgaacatcgacgccgagggcattgacatgggcccgtccccgacggac
gccgccctcgccgccgacctggcgctgccgatcgaggagctggagctcacggtccggtcg
tacaactgcctcaagcgtgagggcatccactccgtgggtgagctcgtcgcgcggtccgag
gcggacctgctcgacatccggaacttcggtgcgaagtccatcgacgaggtcaaggccaag
ctggccggcatgggcctcgcgctgaaggactcgcctcccgggttcgacccgaccgccgcg
gcggacgcgttcggcgcggacgacgacgcggacgcgggtttcgtggagaccgagcagtac
tga
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