Streptomyces sp. 4F: ASR50_21935
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Entry
ASR50_21935 CDS
T04265
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
strf
Streptomyces sp. 4F
Pathway
strf03420
Nucleotide excision repair
strf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ASR50_21935
03430 Mismatch repair
ASR50_21935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strf03400
]
ASR50_21935
Enzymes [BR:
strf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASR50_21935
DNA repair and recombination proteins [BR:
strf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASR50_21935
MMR (mismatch excision repair)
Other MMR factors
ASR50_21935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ALV51805
LinkDB
All DBs
Position
4872620..4875100
Genome browser
AA seq
826 aa
AA seq
DB search
MSSLFDDSFLADLQAQRGPADEPPPPPEDEHAPEPLPDDLFGGKFDVPPERDSYYRDGAP
RPVIDSAALLEGLNDNQRAAVVHSGSPLLIVAGAGSGKTRVLTHRIAHLLAERGVHPGQI
LAITFTNKAAGEMRERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQATDGFEKTLAQAYAL
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGGASEHPVDVPPEAEVPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQ
NYRSTQTILSAANAVIERNESRRPKNLWTNAGEGARITGYVADTEHDEAQFVADEIDRLT
DAGEAKAGDVAVFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLAN
PEDSVPLRRILNVPKRGIGDRAEAMIDALAQREKISFPQALRRVDEAYGMAARSANAVKR
FNTLMEDLRTVVESGAGPATVLEAILERTGYLAELQASTDPQDETRIENLQELAAVALEF
EQERGEGETGTLADFLEQVALVADSDQIPDEEDGDGVITLMTLHTAKGLEFPVVFLTGME
DGVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRSVMRSAWGQPSYNPPSRFLEEI
PATHLEWKRTGASGPVANGPVSGVAASLSSSRSRSSASGASGFATRRTSEKPVVSLAVGD
RVTHDQFGLGTVVAVKGTGANAEATIDFGDEKPKRLLLRYAPVEKL
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctccaggcccagcgcggcccggcg
gacgagcccccgccgccgcccgaggacgagcacgccccggagcccctgccggacgacctg
ttcggcgggaagttcgacgtgcccccggagcgggactcctactaccgggacggcgccccg
cgcccggtgatcgactccgccgcgctgctggaggggctgaacgacaaccagcgcgccgcg
gtcgtgcactccggctccccgctgctcatcgtcgccggagccgggtccggcaagacccgc
gtgctcacccaccgcatcgcccacctgctcgccgagcggggcgtgcacccgggccagatc
ctcgcgatcaccttcaccaacaaggccgcgggcgagatgagggagcgcgtcgagcagctc
gtcggcccccgggcgaacgcgatgtgggtgatgaccttccacagcgcgtgcgtccgcatc
ctgcgccgcgagtccaagaagctcggcttcacgtcgtccttctcgatctacgacgccgcc
gactccaagcgtctgatggccctggtctgccgtgacctggacctcgaccccaagcgcttc
ccgccgaagtccttcagcgccaagatcagcaacctgaagaacgagctgatcgacgaggag
gacttcgccgcccaggccaccgacggcttcgagaagaccctcgcccaggcctacgcgctc
taccagtcccgcctgcgcgaggcgaacgcgctggacttcgacgacctgatcatgacgacg
gtcaacctgctccgcgccttccccgacgtcgccgagcactaccgccgccgcttccggcac
gtcctggtcgacgagtaccaggacaccaaccacgcccagtacgccctggtgcgcgagctg
gtcgggggcgcctccgagcaccccgtcgacgtcccgccggaggccgaggtgccgcccgcc
gagctgtgcgtggtgggcgacgccgaccagtccatctacgccttccgcggcgcgacgatc
cgcaacatcctccagttcgaggaggactacccggacgcgacgaccatcctgctggagcag
aactaccgctccacgcagacgatcctgtccgccgccaacgccgtcatcgagcgcaacgag
tcccgccgcccgaagaacctgtggaccaacgcgggcgagggcgcccgcatcacggggtac
gtcgcggacaccgagcacgacgaggcgcagttcgtcgccgacgagatagaccgcctcacg
gacgcgggcgaggccaaggccggcgacgtcgccgtcttctaccgcaccaacgcccagtcc
cgtgtcttcgaggagatcttcatccgcgtcggcctgccctacaaggtcgtcggcggcgtg
cgcttctacgagcgcaaggaggtccgggacgtcctggcctacctgcgggtgctggccaac
ccggaggactcggtgccgctgcgccgcatcctcaacgtccccaagcgcggcatcggcgac
cgcgccgaggccatgatcgacgcgctcgcccagcgggagaagatcagcttcccgcaggcg
ctgcgccgcgtcgacgaggcgtacggcatggccgcccggtcggcgaacgccgtcaagcgg
ttcaacacgctgatggaggacctccgcacggtcgtcgagtcgggcgccggaccggcgacg
gtgctggaggccatcctcgaacgcaccggctacctcgccgagttgcaggcctccaccgat
ccgcaggacgagacccgcatcgagaacctccaggaactcgcggccgtcgccctggagttc
gagcaggagcgcggcgagggcgagacgggcacgctggccgacttcctcgagcaggtcgcg
ctggtcgccgactccgaccagatccccgacgaggaggacggcgacggcgtcatcacgctg
atgaccctgcacaccgccaagggcctggagttcccggtcgtcttcctcaccggcatggag
gacggcgtcttcccgcacatgcgcgccctcggccagaccaaggagctggaggaggagcgc
cgcctggcctacgtcggcatcacgcgggcccgcgagcggctctacctcacccggtcggtg
atgcgcagcgcctggggtcagccgtcgtacaacccgccgtcgcgtttcctggaggagatc
ccggccacgcacctggagtggaagcggaccggggcgagcggccccgtggccaacggcccg
gtgtccggggtggccgcgtcgctgtcgtcctcccgctcccgctcgtccgcgtcgggcgcc
tccggcttcgccacccggcgcacctcggagaagcccgtggtgtcgctggccgtcggggac
cgggtcacgcacgaccagttcggtctgggcacggtcgtcgcggtgaagggcacgggggcg
aacgccgaggcgacgatcgacttcggcgacgagaagcccaagcgcctgctgctgcggtac
gcgccggtggagaagctctag
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