Streptomyces sp. 4F: ASR50_24150
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Entry
ASR50_24150 CDS
T04265
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
strf
Streptomyces sp. 4F
Pathway
strf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ASR50_24150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strf03400
]
ASR50_24150
DNA repair and recombination proteins [BR:
strf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ASR50_24150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ALV52187
LinkDB
All DBs
Position
5366580..5367602
Genome browser
AA seq
340 aa
AA seq
DB search
MLHVRSIWNGAISFGLVSIPIKLVNATENHSISFRQIHTEDGGRIRYRKYCELEDREVSS
QEIGKGYEDSDGTIIPITDEDLAGLPIPTAKTIEIVAFVPEDRIDPLQMDAAYYLQAGGA
PAAKPYTLLREALKRSKKVAITKYALRGRERLGMLRVVGDAIAMHGLLWPDEVRAPEGVA
PDADVTVRDKELDLADALMDTLGEVDLEDLHDEYREAVEEVVAAKAAGETPKEAPAPEAG
GGKVLDLMAALENSVRAARESRGEEAEVKQLPQRRTSRSSPKDTGGKKSTSTAKKKTTSS
PRKSTSKTSKASQSEKKATAKKTPAKKSAAKKTASRKRSA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcacgtgaggtccatctggaacggcgcgatctcgttcgggctggtcagcatcccg
atcaagctggtgaacgccaccgagaaccattcgatctccttccgccagatccacaccgag
gacggcggccggatccgctaccggaagtactgcgagctggaggaccgggaggtcagcagc
caggagatcggcaaggggtacgaggactcggacggaacgatcatcccgatcaccgacgag
gacctggccgggctgccgatcccgaccgccaagacgatcgagatcgtcgccttcgtgccc
gaggaccgcatcgacccgctccagatggacgccgcgtactacctccaggcgggtggggct
cccgcggcgaagccgtacacgctgctgcgggaggcgctgaagcggagcaagaaggtcgcg
atcacgaagtacgccctgcgcgggcgggagcggctcggcatgctccgcgtggtgggcgac
gcgatcgccatgcacggcctgctgtggcccgacgaggtgcgcgccccggagggcgtcgcc
ccggacgccgacgtcaccgtgcgcgacaaggagctggacctcgcggacgcgctgatggac
acgctcggggaggtcgacctggaggacctgcacgacgagtaccgcgaggcggtggaggag
gtcgtcgccgcgaaggcggcgggcgagacgcccaaggaggctccggccccggaggccggt
ggcggcaaggtcctggacctgatggcggccctggagaacagcgtccgggcggcgcgggag
tcgcggggggaggaggcggaggtcaagcagcttccgcaacgcaggacgagccgctcgtcg
ccgaaggacacggggggtaagaagtcgacgtcgacggcgaagaagaagacgacgtcgtcg
ccgcggaagtcgacgtcgaagacgtcgaaggcgtcgcagtcggagaagaaggcgacggcg
aagaagacgccggcgaagaagagtgcggcgaagaagacggcatcccgcaaacgctcggcc
tga
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