Streptomyces sp. 4F: ASR50_24235
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Entry
ASR50_24235 CDS
T04265
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
strf
Streptomyces sp. 4F
Pathway
strf00300
Lysine biosynthesis
strf00470
D-Amino acid metabolism
strf01100
Metabolic pathways
strf01110
Biosynthesis of secondary metabolites
strf01120
Microbial metabolism in diverse environments
strf01230
Biosynthesis of amino acids
Module
strf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ASR50_24235
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ASR50_24235
Enzymes [BR:
strf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
ASR50_24235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ALV52200
LinkDB
All DBs
Position
5381840..5383231
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AA seq
463 aa
AA seq
DB search
MSRSAHPAGPRHADVLPEGHYSAPPADLNSLDPKVWSETVTRDADGVLTVGGIDVKRLAE
EYGTPAYVLDEDDFRSRARAWRTAFGDNADVFYAGKAFLSRAVVRWLNEEGLNLDVCSGG
ELATALSAGMPAERIAFHGNNKSVAEIRRAVEAGVGRIVLDSFQEIVRVAHIARELGTRQ
RVQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALQLDGLEVIGIHSHIGS
QIFDMSGFEVAAHRVVGLLKDIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALT
EIVTRECEAAKLRTPRISVEPGRAIVGPTAFTLYEVGTVKPLDGLRTYVSVDGGMSDNIR
TALYDAEYSVSLVSRSSDAEPMLTRVVGKHCESGDIVVKDAFLPGDLAPGDLIAVPATGA
YCRSMASNYNHVLRPPVVAVKDGQARVIVRRETEEDLLRLDVG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttccgcacaccccgccgggccccgtcacgccgacgtcctccccgaggggcac
tactccgcgccgcccgccgacctcaactccctcgaccccaaggtgtggtccgagaccgtc
acccgtgacgccgacggcgtgctcaccgtcggcgggatcgacgtcaagcggctcgccgag
gagtacggcacccccgcctacgttctcgacgaggacgacttccgctcccgggcccgcgcc
tggcgtaccgccttcggcgacaacgccgacgtgttctacgccggcaaggcgttcctgtcc
cgggccgtcgtccgctggctgaacgaggaggggctgaacctcgacgtctgctccggcggc
gagctggccaccgcgctgtccgccgggatgcccgccgagcgcatcgccttccacggcaac
aacaagtccgtcgccgagatccgccgcgccgtcgaggccggcgtcggccggatcgtgctc
gactccttccaggagatcgtccgcgtcgcccacatcgcccgcgagctcggcacccggcag
cgcgtgcagatccgcatcaccgtcggcgtcgaggcgcacacccacgagttcatcgccacc
gcccacgaggaccagaagttcggcatcccgctggccggcggtcaggccgccgaagccgtg
cggcgcgcgcttcagctcgacgggctcgaggtcatcggcatccactcgcacatcggttcg
cagatcttcgacatgtcgggcttcgaggtcgccgcgcaccgcgtggtcgggctgctcaag
gacatccgcgacgagcacggcgtcgagctgcccgagatcgacctcggcggcggcctcggc
atcgcgtacaccagcgacgacgacccccgcgagccgcacgagatcgccaaggcgctcacc
gagatcgtcacccgtgagtgcgaggccgcgaagctgcgcaccccccgcatctccgtcgag
cccggccgcgccatcgtcggcccgaccgcgttcacgctctacgaggtcggcaccgtcaag
ccgctcgacgggctgcgcacgtacgtgtccgtcgacggcggcatgtcggacaacatccgc
accgccctgtacgacgccgagtacagcgtctccctcgtctcccgctcctccgacgccgag
cccatgctgacccgggtcgtcggcaagcactgcgagagcggtgacatcgtggtgaaggac
gcgttcctgccgggggacctggcaccgggtgacctgatcgccgtgccggcgaccggggcg
tactgccggtccatggccagcaactacaaccacgtgctgcggccgccggtggtcgcggtg
aaggacggccaggcgcgcgtcatcgtccggcgcgagacggaggaggacctgctgcggctc
gacgtcggctga
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